STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK79243.1Band 7 protein; COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs; InterPro IPR001972:IPR001107; KEGG: tde:TDE0705 SPFH domain-containing protein/band 7 family protein; PFAM: band 7 protein; SMART: band 7 protein; SPTR: SPFH domain/Band 7 family protein; PFAM: SPFH domain / Band 7 family. (304 aa)    
Predicted Functional Partners:
ADK79242.1
Protein of unknown function DUF107; COGs: COG1585 Membrane protein implicated in regulation of membrane protease activity; InterPro IPR002810; KEGG: tde:TDE1505 hypothetical protein; PFAM: protein of unknown function DUF107; SPTR: Membrane protein, putative; PFAM: NfeD-like.
 
  
 0.915
ADK79244.1
Band 7 protein; COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs; InterPro IPR001972:IPR001107; KEGG: tde:TDE0704 SPFH domain-containing protein/band 7 family protein; PFAM: band 7 protein; SMART: band 7 protein; SPTR: SPFH domain/Band 7 family protein; PFAM: SPFH domain / Band 7 family.
 
    
0.806
ftsH
ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.729
ftsH-2
ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.729
ADK81993.1
HflK protein; HflC and HflK could encode or regulate a protease.
  
     0.514
ADK80815.1
Peptidase M16 domain protein; COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765:IPR007863:IPR001431; KEGG: cts:Ctha_1907 peptidase M16 domain protein; PFAM: peptidase M16 domain protein; SPTR: Peptidase M16 domain protein; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); Belongs to the peptidase M16 family.
  
 0.501
ADK79241.1
Pentapeptide repeat protein; InterPro IPR001646; KEGG: cli:Clim_1473 pentapeptide repeat protein; SPTR: Putative uncharacterized protein; PFAM: Pentapeptide repeats (8 copies).
  
  
 0.496
ADK79245.1
Conserved hypothetical protein; COGs: COG1626 Neutral trehalase; InterPro IPR019775; KEGG: tde:TDE0996 hypothetical protein; SPTR: Trehalase; PFAM: Trehalase.
       0.449
yidC
Membrane protein insertase, YidC/Oxa1 family; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.
  
 
 0.441
ADK79622.1
Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterProIPR013027:IPR000103:IPR002023:IPR011538:IPR 019554:IPR019575:IPR019794:IPR001949; KEGG: dal:Dalk_2559 respiratory-chain NADH dehydrogenase domain 51 kDa subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH dehydrogenase (ubiquinone) 24 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Putative u [...]
  
 
 0.406
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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