STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK79294.1Metal dependent phosphohydrolase; InterPro IPR006675:IPR006674; KEGG: sus:Acid_4618 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SPTR: Metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG. (352 aa)    
Predicted Functional Partners:
ADK81031.1
poly(A) polymerase; COGs: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; InterPro IPR002646:IPR010206; KEGG: tde:TDE1726 polyA polymerase family protein; PFAM: Polynucleotide adenylyltransferase region; SPTR: PolyA polymerase family protein; TIGRFAM: poly(A) polymerase; PFAM: Poly A polymerase head domain; TIGRFAM: poly(A) polymerase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
 
 
 0.923
ADK81016.1
Polynucleotide adenylyltransferase/metal dependent phosphohydrolase; COGs: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; InterPro IPR002646:IPR006674:IPR006675; KEGG: tde:TDE1033 polyA polymerase family protein; PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; SPTR: PolyA polymerase family protein; TIGRFAM: metal dependent phophohydrolase; PFAM: HD domain; Poly A polymerase head domain; TIGRFAM: uncharacterized domain HDIG.
 
  
 0.573
dcd
Deoxycytidine triphosphate deaminase; Bifunctional enzyme that catalyzes both the deamination of dCTP to dUTP and the hydrolysis of dUTP to dUMP without releasing the toxic dUTP intermediate.
       0.549
ADK79295.1
Putative two component, sigma54 specific, transcriptional regulator, Fis family; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR003593:IPR002078; KEGG: dae:Dtox_1013 two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; SMART: response regulator receiver; AAA ATPase; SPTR: Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: Response regulator receiver domain; Sigma-54 interact [...]
       0.501
ADK80700.1
OmpA/MotB domain protein; COGs: COG1360 Flagellar motor protein; InterPro IPR006665; KEGG: tde:TDE2765 flagellar motor protein MotB; PFAM: OmpA/MotB domain protein; SPTR: Chemotaxis protein MotB; PFAM: OmpA family.
    
   0.471
ADK80701.1
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
    
   0.471
ADK82766.1
COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509; KEGG: tde:TDE2434 polysaccharide deacetylase family protein; PFAM: polysaccharide deacetylase; SPTR: Polysaccharide deacetylase family protein; PFAM: Polysaccharide deacetylase.
 
     0.468
ADK81724.1
GCN5-related N-acetyltransferase; COGs: COG3393 acetyltransferase; InterPro IPR000182; KEGG: tpp:TPASS_0815 hypothetical protein; PFAM: GCN5-related N-acetyltransferase; SPTR: Acetyltransferase, gnat family; PFAM: FR47-like protein.
  
    0.426
ADK83018.1
Hemagluttinin repeat-containing protein; InterPro IPR008619; KEGG: sml:Smlt1009 putative glycine-rich autotransporter protein; PFAM: Haemagluttinin repeat-containing protein; SPTR: Outer membrane autotransporter barrel domain protein.
  
     0.409
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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