STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK79303.1InterPro IPR001623; KEGG: tau:Tola_2364 heat shock protein DnaJ domain protein; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; SPTR: Heat shock protein DnaJ domain protein; PFAM: DnaJ domain. (153 aa)    
Predicted Functional Partners:
secY
Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.
   
 
 0.830
ADK79302.1
Hypothetical protein; InterPro IPR019734:IPR013026; KEGG: tde:TDE0867 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.776
ADK79301.1
Hypothetical protein; KEGG: rop:ROP_00830 cytochrome c oxidase subunit I; SPTR: Cytochrome c oxidase subunit I.
       0.773
ADK80590.1
KEGG: rbi:RB2501_05130 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.715
ADK82912.1
InterPro IPR002482:IPR018392; KEGG: tde:TDE2281 LysM domain-containing protein; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; SPTR: LysM domain protein; PFAM: Hsp70 protein; LysM domain.
 
 
 0.627
ADK79172.1
Metallophosphoesterase; InterPro IPR004843; KEGG: cch:Cag_0430 hypothetical protein; PFAM: metallophosphoesterase; SPTR: Putative uncharacterized protein.
  
     0.564
ADK80717.1
Heat shock protein 70; COGs: COG0443 Molecular chaperone; InterPro IPR001023:IPR013126:IPR018181; KEGG: tit:Thit_0894 chaperone protein DnaK; PFAM: Heat shock protein 70; SPTR: Chaperone protein DnaK; PFAM: Hsp70 protein.
  
 
 0.563
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.563
dnaK-2
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.563
ADK82866.1
KEGG: lic:LIC12218 histidine kinase sensor protein; SPTR: Sensory transduction histidine kinases; PFAM: Histidine kinase.
  
     0.535
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.