STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK79488.1TPR repeat-containing protein; InterPro IPR019734:IPR001440:IPR013026; KEGG: cyc:PCC7424_2005 TPR repeat-containing protein; PFAM: TPR repeat-containing protein; SPTR: TPR repeat-containing protein; PFAM: Tetratricopeptide repeat. (248 aa)    
Predicted Functional Partners:
ADK81478.1
Tetratricopeptide TPR_2 repeat protein; InterPro IPR019734:IPR001440:IPR013105:IPR013026; KEGG: tde:TDE1126 TPR domain-containing protein; PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SPTR: TPR domain protein; PFAM: Tetratricopeptide repeat.
 
 
 0.800
ADK79489.1
KEGG: ank:AnaeK_3958 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
ADK83369.1
Tetratricopeptide TPR_2 repeat protein; COGs: COG4783 Putative Zn-dependent protease contains TPR repeats; InterPro IPR001440:IPR013105:IPR019734:IPR013026; KEGG: tde:TDE0993 putative lipoprotein; PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SPTR: Putative lipoprotein; PFAM: Tetratricopeptide repeat.
  
     0.755
ADK81477.1
Tetratricopeptide TPR_2 repeat protein; InterPro IPR019734:IPR001440:IPR013105:IPR013026; KEGG: tde:TDE1127 TPR domain-containing protein; PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SPTR: TPR domain protein; PFAM: Tetratricopeptide repeat.
 
   
 0.753
ADK81560.1
Tetratricopeptide TPR_2 repeat protein; InterPro IPR019734:IPR013105:IPR001440:IPR013026; KEGG: tde:TDE1244 TPR domain-containing protein; PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: TPR domain protein; PFAM: Tetratricopeptide repeat.
  
     0.739
ADK82172.1
Peptidase C14 caspase catalytic subunit p20; COGs: COG0666 FOG: Ankyrin repeat; InterProIPR002110:IPR003646:IPR020683:IPR010466:IPR 011600:IPR018247:IPR001917; KEGG: sit:TM1040_0843 OmpA/MotB; PFAM: peptidase C14 caspase catalytic subunit p20; Ankyrin; protein of unknown function DUF1058; SMART: SH3 domain protein; Ankyrin; SPTR: Putative uncharacterized protein; PFAM: Caspase domain; Bacterial SH3 domain; Ankyrin repeat.
 
 0.722
ADK79487.1
Dihydropyrimidinase; COGs: COG0044 Dihydroorotase and related cyclic amidohydrolase; InterPro IPR006680:IPR011778; KEGG: azc:AZC_2674 phenylhydantoinase; PFAM: amidohydrolase; SPTR: D-hydantoinase; TIGRFAM: dihydropyrimidinase; PFAM: Amidohydrolase family; TIGRFAM: D-hydantoinase; dihydroorotase, multifunctional complex type.
   
   0.721
ADK79363.1
Ankyrin; InterPro IPR002110:IPR020683; KEGG: afv:AFLA_025240 ankyrin repeat-containing protein, putative; PFAM: Ankyrin; SMART: Ankyrin; SPTR: Ankyrin repeat-containing protein, putative; PFAM: Ankyrin repeat.
 
 0.716
ADK81198.1
Tetratricopeptide TPR_2 repeat protein; InterPro IPR019734:IPR013026:IPR013105:IPR001440; KEGG: tde:TDE1348 TPR domain-containing protein; PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: TPR domain protein; manually curated; PFAM: Tetratricopeptide repeat.
 
   
 0.686
ADK82242.1
Tetratricopeptide TPR_2 repeat protein; COGs: COG3063 Tfp pilus assembly protein PilF; InterPro IPR019734:IPR013026:IPR001440:IPR013105; KEGG: bdu:BDU_193 hypothetical protein; PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SPTR: TPR domain protein; PFAM: Tetratricopeptide repeat.
  
     0.683
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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