STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srkAAminoglycoside phosphotransferase; A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response. (338 aa)    
Predicted Functional Partners:
ADK80001.1
Metallophosphoesterase; InterPro IPR004843; KEGG: mgm:Mmc1_0230 hypothetical protein; PFAM: metallophosphoesterase; SPTR: Putative uncharacterized protein; PFAM: Calcineurin-like phosphoesterase.
 
    0.633
ADK82152.1
COGs: COG2925 Exonuclease I; InterPro IPR013520:IPR013620:IPR006055; KEGG: cja:CJA_2637 exonuclease I; PFAM: Exonuclease domain protein; Exonuclease RNase T and DNA polymerase III; PRIAM: Exodeoxyribonuclease I; SMART: Exonuclease; SPTR: Exodeoxyribonuclease I; PFAM: Exonuclease; Exonuclease C-terminal.
  
     0.587
ADK79345.1
COGs: COG1010 Precorrin-3B methylase; InterPro IPR006363:IPR002750:IPR000878; KEGG: rca:Rcas_0637 precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; cobalamin (vitamin B12) biosynthesis CbiG protein; SPTR: Precorrin-3B C17-methyltransferase; TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: Cobalamin synthesis G C-terminus; Tetrapyrrole (Corrin/Porphyrin) Methylases; Cobalamin synthesis G N-terminal; TIGRFAM: precorrin-3B C17-methyltransferase.
  
    0.576
ADK79680.1
COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014:IPR001610:IPR003661:IPR003594:IPR 004358:IPR013767:IPR013655:IPR005467:IPR000700; KEGG: mgm:Mmc1_2953 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; SPTR: Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90- [...]
  
    0.563
rlmL
rRNA (guanine-N(2)-)-methyltransferase; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family.
 
     0.541
ADK79679.1
Protein of unknown function DUF125 transmembrane; COGs: COG1814 Uncharacterized membrane protein; InterPro IPR003251:IPR008217; KEGG: hor:Hore_01890 uncharacterized membrane protein; PFAM: protein of unknown function DUF125 transmembrane; Rubrerythrin; SPTR: Uncharacterized membrane protein; PFAM: Rubrerythrin; VIT family; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence.
       0.427
ADK80606.1
COGs: COG1092 SAM-dependent methyltransferase; KEGG: pca:Pcar_2072 23S rRNA m(2)G2445 methyltransferase; PRIAM: rRNA (guanine-N(2)-)-methyltransferase; SPTR: Putative uncharacterized protein; PFAM: S-adenosylmethionine-dependent methyltransferase.
  
     0.419
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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