STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK79714.1KEGG: nth:Nther_1851 hypothetical protein; SPTR: Putative uncharacterized protein. (243 aa)    
Predicted Functional Partners:
ADK79712.1
Tripartite ATP-independent periplasmic transporter DctQ component; COGs: COG3090 TRAP-type C4-dicarboxylate transport system small permease component; InterPro IPR007387; KEGG: amt:Amet_3728 tripartite ATP-independent periplasmic transporter DctQ; PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; SPTR: Tripartite ATP-independent periplasmic transporter, DctQ component; PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component.
 
     0.863
ADK79715.1
Creatinase; COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR000587:IPR000994; KEGG: gtn:GTNG_2272 Xaa-Pro aminopeptidase; PFAM: creatinase; peptidase M24; SPTR: Creatinase; PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain.
 
     0.812
ADK79713.1
TRAP dicarboxylate transporter, DctM subunit; COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR010656:IPR004681; KEGG: amt:Amet_3727 TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit.
 
     0.780
ADK79718.1
Creatinase; COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR000587:IPR000994; KEGG: gtn:GTNG_2272 Xaa-Pro aminopeptidase; PFAM: creatinase; peptidase M24; SPTR: Ectoine utilization protein EutD; PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain.
 
     0.770
ADK79711.1
Extracellular solute-binding protein, family 7; COGs: COG1638 TRAP-type C4-dicarboxylate transport system periplasmic component; InterPro IPR018389; KEGG: amt:Amet_3729 TRAP dicarboxylate transporter-DctP subunit; PFAM: Extracellular solute-binding protein, family 7; SPTR: TRAP dicarboxylate transporter-DctP subunit; PFAM: Bacterial extracellular solute-binding protein, family 7.
 
     0.656
ADK79717.1
COGs: COG2423 ornithine cyclodeaminase mu-crystallin homolog; InterPro IPR003462; KEGG: gtn:GTNG_2271 ectoine utilization protein EutC; PFAM: ornithine cyclodeaminase/mu-crystallin; PRIAM: Ornithine cyclodeaminase; SPTR: Ornithine cyclodeaminase; PFAM: Ornithine cyclodeaminase/mu-crystallin family; TIGRFAM: ectoine utilization protein EutC.
 
     0.614
ADK79716.1
Pyridoxal-5'-phosphate-dependent protein beta subunit; COGs: COG1171 Threonine dehydratase; InterPro IPR001926; KEGG: gtn:GTNG_2276 threonine dehydratase-like protein; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: Threonine dehydratase-like protein; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: ectoine utilization protein EutB.
 
     0.591
ADK79719.1
COGs: COG0527 Aspartokinase; InterPro IPR001048:IPR018042:IPR001341; KEGG: amt:Amet_3407 aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; SPTR: Aspartokinase; TIGRFAM: aspartate kinase; manually curated; PFAM: Amino acid kinase family; TIGRFAM: aspartate kinase; Belongs to the aspartokinase family.
       0.507
ADK81940.1
COGs: COG2159 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: tte:TTE1365 metal-dependent hydrolase of the TIM-barrel fold; PFAM: amidohydrolase 2; SPTR: Amidohydrolase family protein; PFAM: Amidohydrolase.
  
     0.484
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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