STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK79725.1KEGG: tde:TDE2185 putative lipoprotein; SPTR: Putative lipoprotein. (435 aa)    
Predicted Functional Partners:
ADK79724.1
ABC transporter related protein; COGs: COG3839 ABC-type sugar transport systems ATPase components; InterPro IPR003593:IPR003439:IPR005116:IPR017871; KEGG: tma:TM1276 sugar ABC transporter, ATP-binding protein; PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase; SPTR: Multiple sugar-binding transport ATP-binding protein MsmK; PFAM: ABC transporter; TOBE domain.
  
 
 0.778
ADK79727.1
KEGG: tde:TDE0063 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.594
ADK79726.1
Conserved hypothetical protein; COGs: COG1242 Fe-S oxidoreductase; InterPro IPR006638:IPR007197:IPR005911; KEGG: dat:HRM2_32150 predicted Fe-S oxidoreductase; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Predicted Fe-S oxidoreductase; TIGRFAM: conserved hypothetical protein; PFAM: Radical SAM superfamily; TIGRFAM: radical SAM protein, TIGR01212 family.
       0.579
ADK80911.1
ABC transporter related protein; COGs: COG3839 ABC-type sugar transport systems ATPase components; InterPro IPR003439:IPR013611:IPR017871:IPR003593; KEGG: tpe:Tpen_1165 ABC transporter related; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; SPTR: Putative uncharacterized protein; PFAM: ABC transporter; TOBE domain.
  
 
 0.487
ADK80980.1
ABC transporter related protein; COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR003593:IPR017871:IPR003439:IPR013611; KEGG: pjd:Pjdr2_0286 ABC transporter related; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; SPTR: Putative uncharacterized protein; PFAM: ABC transporter; TOBE domain.
  
 
 0.487
ADK82950.1
ABC transporter related protein; COGs: COG3839 ABC-type sugar transport systems ATPase components; InterPro IPR017871:IPR003593:IPR003439:IPR013611; KEGG: tna:CTN_0249 sugar ABC transporter, ATP-binding protein; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; SPTR: Sugar ABC transporter, ATP-binding protein; PFAM: ABC transporter; TOBE domain.
  
 
 0.487
ADK82498.1
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: dde:Dde_3658 glucose transport system permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Glucose transport system permease protein; PFAM: Binding-protein-dependent transport system inner membrane component.
  
 
 0.420
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.