STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK79749.1Ferritin Dps family protein; Iron-storage protein. (158 aa)    
Predicted Functional Partners:
ADK79748.1
COGs: COG2033 Desulfoferrodoxin; InterPro IPR004462:IPR002742:IPR004793; KEGG: dvl:Dvul_0204 desulfoferrodoxin; PFAM: Desulfoferrodoxin ferrous iron-binding region; Desulfoferrodoxin Dfx domain protein; SPTR: Desulfoferrodoxin; TIGRFAM: desulfoferrodoxin; PFAM: Desulfoferrodoxin, N-terminal domain; Desulfoferrodoxin; TIGRFAM: desulfoferrodoxin FeS4 iron-binding domain; desulfoferrodoxin; desulfoferrodoxin ferrous iron-binding domain.
  
  
 0.964
ADK79750.1
Rubredoxin-type Fe(Cys)4 protein; COGs: COG1773 Rubredoxin; InterPro IPR001052:IPR004039:IPR018527; KEGG: kol:Kole_2138 rubredoxin-type Fe(Cys)4 protein; PFAM: Rubredoxin-type Fe(Cys)4 protein; SPTR: Rubredoxin; PFAM: Rubredoxin.
  
  
 0.833
ADK79483.1
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
  
  
 0.714
ADK79747.1
Rubrerythrin; COGs: COG1592 Rubrerythrin; InterPro IPR003251:IPR004039:IPR009040; KEGG: drt:Dret_1205 rubrerythrin; PFAM: Rubrerythrin; SPTR: Rubrerythrin; PFAM: Rubrerythrin.
  
  
 0.709
ADK79746.1
InterPro IPR014127; KEGG: emi:Emin_1510 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2400); TIGRFAM: conserved hypothetical protein TIGR02757.
 
    0.590
rpsP
COGs: COG0228 Ribosomal protein S16; InterPro IPR000307; KEGG: tde:TDE0881 ribosomal protein S16; PFAM: ribosomal protein S16; SPTR: Ribosomal protein S16; TIGRFAM: ribosomal protein S16; PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.
  
    0.552
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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