STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK79836.1KEGG: lbf:LBF_2813 PIN domain protein; SPTR: Putative PIN domain protein. (140 aa)    
Predicted Functional Partners:
ADK79557.1
ATPase; COGs: COG1373 ATPase (AAA+ superfamily); InterPro IPR011579; KEGG: hya:HY04AAS1_1358 ATPase; PFAM: ATPase; SPTR: ATPase; PFAM: Archaeal ATPase.
  
     0.558
ADK79838.1
Transcriptional regulator/antitoxin, MazE; InterPro IPR007159; KEGG: lbf:LBF_0717 proteic killer gene system protein, suppressor of inhibitory function of MazF; PFAM: SpoVT/AbrB domain protein; SPTR: Putative PemI family protein; PFAM: SpoVT / AbrB like domain.
 
     0.534
ADK79586.1
ATPase; COGs: COG1373 ATPase (AAA+ superfamily); InterPro IPR011579; KEGG: cbd:CBUD_0184 hypothetical ATPase; PFAM: ATPase; SPTR: Hypothetical ATPase; PFAM: Archaeal ATPase.
  
     0.533
ADK79837.1
Transcriptional modulator of MazE/toxin, MazF; Toxic component of a type II toxin-antitoxin (TA) system.
 
   
 0.526
ADK81504.1
KEGG: csa:Csal_1702 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Putative transposase, YhgA-like; TIGRFAM: conserved hypothetical protein (putative transposase or invertase).
  
     0.479
ADK81312.1
Protein of unknown function DUF497; COGs: COG2929 conserved hypothetical protein; InterPro IPR007460; KEGG: dol:Dole_0658 hypothetical protein; PFAM: protein of unknown function DUF497; SPTR: Putative uncharacterized protein; manually curated; PFAM: Protein of unknown function (DUF497).
  
     0.453
ADK79551.1
KEGG: gfo:GFO_3473 PilT domain-containing protein; SPTR: PIN domain containing protein; PFAM: PIN domain.
  
   
 0.442
ADK79564.1
KEGG: gfo:GFO_3473 PilT domain-containing protein; SPTR: PIN domain containing protein.
  
   
 0.442
ADK82134.1
KEGG: csa:Csal_1702 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Putative transposase, YhgA-like; TIGRFAM: conserved hypothetical protein (putative transposase or invertase).
  
     0.436
ADK83244.1
Protein of unknown function DUF497; COGs: COG2929 conserved hypothetical protein; InterPro IPR007460; KEGG: dol:Dole_0658 hypothetical protein; PFAM: protein of unknown function DUF497; SPTR: Putative uncharacterized protein; manually curated; PFAM: Protein of unknown function (DUF497).
  
     0.436
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.