STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK79838.1Transcriptional regulator/antitoxin, MazE; InterPro IPR007159; KEGG: lbf:LBF_0717 proteic killer gene system protein, suppressor of inhibitory function of MazF; PFAM: SpoVT/AbrB domain protein; SPTR: Putative PemI family protein; PFAM: SpoVT / AbrB like domain. (82 aa)    
Predicted Functional Partners:
ADK79837.1
Transcriptional modulator of MazE/toxin, MazF; Toxic component of a type II toxin-antitoxin (TA) system.
 
 
 0.988
ADK82696.1
InterPro IPR003477; KEGG: npu:Npun_R1595 transcriptional modulator of MazE/toxin, MazF; PFAM: PemK family protein; SPTR: Transcriptional modulator of MazE/toxin, MazF; manually curated; PFAM: PemK-like protein.
 
 
 0.890
ADK79550.1
KEGG: gfo:GFO_0860 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.639
ADK79563.1
KEGG: gfo:GFO_0860 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.616
ADK79564.1
KEGG: gfo:GFO_3473 PilT domain-containing protein; SPTR: PIN domain containing protein.
 
     0.604
ADK79839.1
Transcriptional regulator, LacI family; COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR001761; KEGG: tte:TTE1952 transcriptional regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; SPTR: HTH-type transcriptional repressor cytR; PFAM: Bacterial regulatory proteins, lacI family; family.
       0.601
ADK79551.1
KEGG: gfo:GFO_3473 PilT domain-containing protein; SPTR: PIN domain containing protein; PFAM: PIN domain.
 
     0.575
ADK79836.1
KEGG: lbf:LBF_2813 PIN domain protein; SPTR: Putative PIN domain protein.
 
     0.534
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.