STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK79849.1ABC transporter related protein; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: ank:AnaeK_4048 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related; PFAM: ABC transporter. (230 aa)    
Predicted Functional Partners:
ADK82396.1
Protein of unknown function DUF214; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: cts:Ctha_0502 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: Putative uncharacterized protein; PFAM: Predicted permease.
 
 0.994
ADK79850.1
Protein of unknown function DUF214; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838:IPR005829; KEGG: tde:TDE1851 ABC transporter, permease protein, putative; PFAM: protein of unknown function DUF214; SPTR: ABC transporter, permease protein, putative; PFAM: Predicted permease.
 
 
 0.969
ADK79851.1
Protein of unknown function DUF214; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: tde:TDE1850 ABC transporter, permease protein, putative; PFAM: protein of unknown function DUF214; SPTR: Putative ABC transporter, permease protein; PFAM: Predicted permease.
  
 
 0.921
ADK82827.1
Oligopeptide/dipeptide ABC transporter, ATPase subunit; COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component; InterProIPR017871:IPR003593:IPR003439:IPR013563:IPR 010066; KEGG: tvo:TVN1329 ABC-type peptide transport system, ATPase component; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; SPTR: ABC transport system ATP-binding protein P1P2A1A2; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oli [...]
 
    
0.899
ADK82976.1
Protein of unknown function DUF214; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: hor:Hore_23270 ABC-type transport system, involved in lipoprotein release, permease component; PFAM: protein of unknown function DUF214; SPTR: ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
 
 
 0.894
ADK79852.1
KEGG: tde:TDE1849 hypothetical protein; SPTR: Putative uncharacterized protein.
   
 
 0.887
ADK82975.1
Protein of unknown function DUF214; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: hor:Hore_23230 ABC-type transport system, involved in lipoprotein release, permease component; PFAM: protein of unknown function DUF214; SPTR: ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
 
 
 0.873
ADK82394.1
Efflux transporter, RND family, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: cts:Ctha_0504 efflux transporter, RND family, MFP subunit; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.824
ADK79846.1
COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: msi:Msm_1594 glycosyltransferase/CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; PFAM: glycosyl transferase family 2; SPTR:Glycosyltransferase/CDP- glycerol:poly(Glycerophosphate) glycerophosphotransferase, GT2 family; PFAM: Glycosyl transferase family 2.
 
 
   0.807
ADK79848.1
COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: bha:BH3661 teichuronic acid biosynthesis; PFAM: glycosyl transferase family 2; SPTR: Teichuronic acid biosynthesis; PFAM: Glycosyl transferase family 2.
   
   0.787
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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