STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK79885.1COGs: COG4213 ABC-type xylose transport system periplasmic component; KEGG: tex:Teth514_0155 D-xylose ABC transporter, periplasmic substrate-binding protein; SPTR: D-xylose ABC transporter, periplasmic substrate-binding protein; PFAM: family; TIGRFAM: D-xylose ABC transporter, substrate-binding protein. (367 aa)    
Predicted Functional Partners:
ADK79887.1
Inner-membrane translocator; COGs: COG4214 ABC-type xylose transport system permease component; InterPro IPR001851; KEGG: mta:Moth_2020 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.993
ADK79886.1
ABC transporter related protein; COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: tit:Thit_0247 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter.
 
 0.967
ADK82708.1
Inner-membrane translocator; COGs: COG4214 ABC-type xylose transport system permease component; InterPro IPR001851; KEGG: hor:Hore_19480 monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; SPTR: Monosaccharide-transporting ATPase; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.958
ADK82709.1
ABC transporter related protein; COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003593:IPR003439:IPR017871; KEGG: amt:Amet_2813 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related; PFAM: ABC transporter.
 
 0.887
ADK80990.1
Inner-membrane translocator; COGs: COG4214 ABC-type xylose transport system permease component; InterPro IPR001851; KEGG: amt:Amet_2812 monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; SPTR: Monosaccharide-transporting ATPase; PFAM: Branched-chain amino acid transport system / permease component.
  
 0.800
ADK83151.1
Inner-membrane translocator; COGs: COG4214 ABC-type xylose transport system permease component; InterPro IPR001851; KEGG: gtn:GTNG_1799 L-arabinose membrane permease; PFAM: inner-membrane translocator; SPTR: Monosaccharide-transporting ATPase; PFAM: Branched-chain amino acid transport system / permease component.
  
 0.797
ADK80761.1
Inner-membrane translocator; COGs: COG4214 ABC-type xylose transport system permease component; InterPro IPR001851; KEGG: cce:Ccel_2684 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component.
  
 0.795
ADK80762.1
ABC transporter related protein; COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: cce:Ccel_2686 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related; PFAM: ABC transporter.
  
 0.711
ADK83152.1
ABC transporter related protein; COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: gka:GK1909 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter ATP-binding protein; PFAM: ABC transporter.
  
 0.708
ADK79888.1
Oxidoreductase domain protein; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: hap:HAPS_1534 myoinositol 2-dehydrogenase with oxidoreductase domain; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: Inositol 2-dehydrogenase; PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold.
       0.648
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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