STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK79973.1COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: dge:Dgeo_2664 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: ABC-type sugar transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component. (299 aa)    
Predicted Functional Partners:
ADK79974.1
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: dge:Dgeo_2663 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: ABC-type sugar transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
  0.993
ADK79975.1
Extracellular solute-binding protein family 1; COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: dge:Dgeo_2662 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: ABC-type sugar transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding protein.
 
  0.984
ADK79769.1
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: bbe:BBR47_57320 ABC transporter permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Glycerol-3-phosphat transport system; PFAM: Binding-protein-dependent transport system inner membrane component.
 
  0.968
ADK79855.1
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: bbe:BBR47_57320 ABC transporter permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: ABC transporter permease protein; PFAM: Binding-protein-dependent transport system inner membrane component.
 
  0.968
ADK79770.1
Extracellular solute-binding protein family 1; COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: bbe:BBR47_57330 probable glycerol-3-phosphate ABC transporter substrate binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: Putative uncharacterized protein; PFAM: Bacterial extracellular solute-binding protein.
 
  0.965
ADK79854.1
Extracellular solute-binding protein family 1; COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: bbe:BBR47_57330 probable glycerol-3-phosphate ABC transporter substrate binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: Probable glycerol-3-phosphate ABC transporter substrate binding protein; PFAM: Bacterial extracellular solute-binding protein.
 
  0.964
ADK79768.1
Binding-protein-dependent transport systems inner membrane component; COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: bbe:BBR47_57310 ABC transporter permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Putative uncharacterized protein; PFAM: Binding-protein-dependent transport system inner membrane component.
  
  
 
0.926
ADK79856.1
COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: mno:Mnod_6752 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.
  
  
 
0.922
ADK79776.1
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: cju:C8J_1586 hypothetical protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
   0.848
ADK82721.1
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: hau:Haur_1151 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
   0.846
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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