STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK80002.1Hypothetical protein; KEGG: pfh:PFHG_03001 malaria antigen; SPTR: Transcription factor with AP2 domain(S), putative; TIGRFAM: DnaD and phage-associated domain. (311 aa)    
Predicted Functional Partners:
ADK80001.1
Metallophosphoesterase; InterPro IPR004843; KEGG: mgm:Mmc1_0230 hypothetical protein; PFAM: metallophosphoesterase; SPTR: Putative uncharacterized protein; PFAM: Calcineurin-like phosphoesterase.
       0.773
ADK80003.1
InterPro IPR000719; KEGG: cbe:Cbei_1151 protein kinase; SPTR: Protein kinase.
       0.773
ADK80000.1
Hypothetical protein; KEGG: cyh:Cyan8802_0186 6-phosphofructokinase; SPTR: Putative molybdenum transport ATP-binding protein ModF.
       0.642
ADK79999.1
KEGG: pfa:MAL13P1.32 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.445
ADK80004.1
ATP-dependent transcriptional regulator, MalT-like, LuxR family; COGs: COG2909 ATP-dependent transcriptional regulator protein; InterPro IPR000792; KEGG: swo:Swol_1080 ATP-dependent transcriptional regulator-like protein; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; SPTR: ATP-dependent transcriptional regulator-like protein; PFAM: Bacterial regulatory proteins, luxR family.
       0.435
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.