STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
ADK80004.1ATP-dependent transcriptional regulator, MalT-like, LuxR family; COGs: COG2909 ATP-dependent transcriptional regulator protein; InterPro IPR000792; KEGG: swo:Swol_1080 ATP-dependent transcriptional regulator-like protein; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; SPTR: ATP-dependent transcriptional regulator-like protein; PFAM: Bacterial regulatory proteins, luxR family. (826 aa)    
Predicted Functional Partners:
ADK79632.1
Heat shock protein Hsp20; COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR002068; KEGG: tde:TDE1029 HSP20/alpha crystallin family protein; PFAM: heat shock protein Hsp20; SPTR: Small heat shock protein; PFAM: Hsp20/alpha crystallin family; Belongs to the small heat shock protein (HSP20) family.
    
 
 0.485
ADK80812.1
Heat shock protein Hsp20; COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR002068; KEGG: ddf:DEFDS_1576 heat shock protein Hsp20; PFAM: heat shock protein Hsp20; SPTR: Strongly similar to small heat shock protein; PFAM: Hsp20/alpha crystallin family.
    
 
 0.485
ADK80813.1
Heat shock protein Hsp20; COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR002068; KEGG: srm:SRM_02579 heat shock protein; PFAM: heat shock protein Hsp20; SPTR: Heat shock protein Hsp20; PFAM: Hsp20/alpha crystallin family; Belongs to the small heat shock protein (HSP20) family.
    
 
 0.485
ADK83119.1
Heat shock protein Hsp20; InterPro IPR002068; KEGG: dde:Dde_2798 small HspC2 heat shock protein; PFAM: heat shock protein Hsp20; SPTR: Small HspC2 heat shock protein; PFAM: Hsp20/alpha crystallin family; Belongs to the small heat shock protein (HSP20) family.
    
 
 0.485
ADK80005.1
Hypothetical protein; KEGG: cdu:CD36_23630 cell surface flocculin, putative; SPTR: Cell wall protein, putative (Cell wall adhesin, putative) (Cell surface flocculin, putative).
       0.459
ADK80003.1
InterPro IPR000719; KEGG: cbe:Cbei_1151 protein kinase; SPTR: Protein kinase.
       0.452
ADK80001.1
Metallophosphoesterase; InterPro IPR004843; KEGG: mgm:Mmc1_0230 hypothetical protein; PFAM: metallophosphoesterase; SPTR: Putative uncharacterized protein; PFAM: Calcineurin-like phosphoesterase.
       0.435
ADK80002.1
Hypothetical protein; KEGG: pfh:PFHG_03001 malaria antigen; SPTR: Transcription factor with AP2 domain(S), putative; TIGRFAM: DnaD and phage-associated domain.
       0.435
ADK81075.1
S-layer domain protein; InterPro IPR001119; KEGG: pjd:Pjdr2_1173 S-layer domain protein; PFAM: S-layer domain protein; SPTR: S-layer domain protein; PFAM: S-layer homology domain.
  
     0.400
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.