STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK80245.1Xylose isomerase domain protein TIM barrel; COGs: COG4130 sugar epimerase; InterPro IPR012307; KEGG: pfs:PFLU2578 hypothetical protein; PFAM: Xylose isomerase domain protein TIM barrel; SPTR: Putative uncharacterized protein; PFAM: Xylose isomerase-like TIM barrel. (274 aa)    
Predicted Functional Partners:
ADK80246.1
Oxidoreductase domain protein; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: cbe:Cbei_4547 oxidoreductase domain-containing protein; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: Inositol 2-dehydrogenase; PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold.
 
 
  0.971
ADK81689.1
Inositol 2-dehydrogenase; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: bac:BamMC406_1347 inositol 2-dehydrogenase; PFAM: oxidoreductase domain protein; Oxidoreductase domain; PRIAM: Inositol 2-dehydrogenase; SPTR: Inositol 2-dehydrogenase; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Belongs to the Gfo/Idh/MocA family.
 
 
  0.964
ADK82088.1
Myo-inosose-2 dehydratase; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307:IPR011418; KEGG: clo:HMPREF0868_0019 AP endonuclease, family 2; PFAM: Xylose isomerase domain protein TIM barrel; AP endonuclease 2 domain protein; PRIAM: Myo-inosose-2 dehydratase; SPTR: 2-keto-myo-inositol dehydratase; PFAM: Xylose isomerase-like TIM barrel.
 
 
  0.959
ADK82087.1
Oxidoreductase domain protein; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: str:Sterm_4014 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: Putative uncharacterized protein; PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold.
 
 
  0.935
ADK80791.1
Oxidoreductase domain protein; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: bcl:ABC0429 myo-inositol 2-dehydrogenase; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: Myo-inositol 2-dehydrogenase; PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold.
 
 
  0.934
ADK79888.1
Oxidoreductase domain protein; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: hap:HAPS_1534 myoinositol 2-dehydrogenase with oxidoreductase domain; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: Inositol 2-dehydrogenase; PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold.
 
 
  0.932
ADK82092.1
Oxidoreductase domain protein; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: str:Sterm_4008 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: Oxidoreductase domain protein; PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold.
 
 
  0.927
ADK79884.1
Xylose isomerase domain protein TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: stm:STM4427 putative endonuclease; PFAM: Xylose isomerase domain protein TIM barrel; SPTR: Putative endonuclease; PFAM: Xylose isomerase-like TIM barrel.
  
 
  0.920
ADK82089.1
Thiamine pyrophosphate protein domain protein TPP-binding protein; COGs: COG3962 Acetolactate synthase; InterPro IPR012001:IPR012000:IPR011766:IPR000399; KEGG: psb:Psyr_3269 pyruvate decarboxylase:pyruvate decarboxylase; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; SPTR: Pyruvate decarboxylase:Pyruvate decarboxylase; PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C [...]
 
    0.692
ADK82090.1
Myo-inositol catabolism IolB domain protein; COGs: COG3718 Uncharacterized protein involved in inositol metabolism; InterPro IPR010669; KEGG: ctc:CTC00509 myo-inositol catabolism protein IolB; PFAM: Myo-inositol catabolism IolB domain protein; SPTR: Myo-inositol catabolism protein iolB; PFAM: KduI/IolB family.
 
    0.669
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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