STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK80307.1Protein of unknown function DUF711; COGs: COG2848 conserved hypothetical protein; InterPro IPR007841; KEGG: hor:Hore_14430 hypothetical protein; PFAM: protein of unknown function DUF711; SPTR: UPF0210 protein Hore_14430; PFAM: Uncharacterized ACR (DUF711). (452 aa)    
Predicted Functional Partners:
ADK80308.1
COGs: COG3830 ACT domain-containing protein; InterPro IPR002912; KEGG: hor:Hore_14440 ACT domain-containing protein; PFAM: amino acid-binding ACT domain protein; SPTR: ACT domain-containing protein; PFAM: ACT domain; Belongs to the UPF0237 family.
 
     0.953
rbsK-3
PfkB domain protein; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
       0.706
ADK80309.1
Basic membrane lipoprotein; COGs: COG1744 Uncharacterized ABC-type transport system periplasmic component/surface lipoprotein; InterPro IPR003760; KEGG: gau:GAU_0026 putative lipoprotein; PFAM: basic membrane lipoprotein; SPTR: Putative uncharacterized protein; PFAM: Basic membrane protein.
       0.533
ADK80310.1
(2Fe-2S)-binding domain protein; COGs: COG2080 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homologs; InterPro IPR006058:IPR001041:IPR002888; KEGG: mta:Moth_1961 (2Fe-2S)-binding; PFAM: [2Fe-2S]-binding domain protein; ferredoxin; SPTR: Putative uncharacterized protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain.
       0.488
ADK80311.1
Inner-membrane translocator; COGs: COG4603 ABC-type uncharacterized transport system permease component; InterPro IPR001851; KEGG: sme:SM_b20126 putative sugar ABC transporter permease protein; PFAM: inner-membrane translocator; SPTR: Putative uncharacterized protein; PFAM: Branched-chain amino acid transport system / permease component.
       0.488
ADK80312.1
Inner-membrane translocator; COGs: COG1079 ABC-type transport system permease component; InterPro IPR001851; KEGG: drm:Dred_2766 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: Sugar ABC transporter, permease protein; PFAM: Branched-chain amino acid transport system / permease component.
       0.488
ADK80313.1
ABC transporter related protein; COGs: COG3845 ABC-type uncharacterized transport systems ATPase components; InterPro IPR017871:IPR003439:IPR003593; KEGG: hor:Hore_08780 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Putative uncharacterized protein; PFAM: ABC transporter.
       0.463
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.