STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK80347.1Amidohydrolase; COGs: COG0402 Cytosine deaminase and related metal-dependent hydrolase; InterPro IPR006680; KEGG: ret:RHE_PC00089 hydrolase protein; PFAM: amidohydrolase; SPTR: Putative uncharacterized protein; PFAM: Amidohydrolase family. (460 aa)    
Predicted Functional Partners:
ADK80348.1
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: gym:GYMC10_0714 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.
       0.475
ADK80349.1
COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: gym:GYMC10_0715 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.
       0.475
ADK82056.1
COGs: COG2233 Xanthine/uracil permease; InterPro IPR006042:IPR017588:IPR006043; KEGG: pmy:Pmen_3698 uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; SPTR: Xanthine permease subfamily; TIGRFAM: xanthine permease; uracil-xanthine permease; PFAM: Permease family; TIGRFAM: uracil-xanthine permease; xanthine permease.
 
  
 0.453
ADK80455.1
Molybdopterin dehydrogenase FAD-binding protein; COGs: COG1319 Aerobic-type carbon monoxide dehydrogenase middle subunit CoxM/CutM homologs; InterPro IPR002346:IPR016166; KEGG: tde:TDE0728 FAD-binding protein, putative; PFAM: molybdopterin dehydrogenase FAD-binding; SPTR: Putative FAD-binding protein; PFAM: FAD binding domain in molybdopterin dehydrogenase.
 
    0.428
ADK80350.1
Extracellular solute-binding protein family 1; COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006061:IPR006059; KEGG: gym:GYMC10_5603 extracellular solute-binding protein family 1; PFAM: extracellular solute-binding protein family 1; SPTR: Extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding protein.
       0.419
ADK80351.1
Glycoside hydrolase family 3 domain protein; COGs: COG1472 Beta-glucosidase-related glycosidase; InterPro IPR019800:IPR001764:IPR002772; KEGG: cth:Cthe_1256 glycoside hydrolase family protein; PFAM: glycoside hydrolase family 3 domain protein; SPTR: Thermostable beta-glucosidase B; PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain.
       0.402
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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