STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK80398.1Inner-membrane translocator; COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: rso:RSc1015 transmembrane ABC transporter protein; PFAM: inner-membrane translocator; SPTR: Probable ribose abc transporter, permease abc transporter protein; PFAM: Branched-chain amino acid transport system / permease component. (322 aa)    
Predicted Functional Partners:
ADK80397.1
Periplasmic binding protein/LacI transcriptional regulator; COGs: COG1879 ABC-type sugar transport system periplasmic component; InterPro IPR001761; KEGG: bpd:BURPS668_1853 putative ribose ABC transporter, periplasmic ribose-binding protein; PFAM: periplasmic binding protein/LacI transcriptional regulator; SPTR: Putative ribose transport system, substrate-binding protein; PFAM: family.
 
 0.949
ADK80394.1
Periplasmic binding protein/LacI transcriptional regulator; COGs: COG1879 ABC-type sugar transport system periplasmic component; InterPro IPR001761; KEGG: rhi:NGR_c17380 putative ribose transport system, substrate-binding protein; PFAM: periplasmic binding protein/LacI transcriptional regulator; SPTR: Putative ribose transport system, substrate-binding protein; PFAM: family.
 
 0.890
ADK80395.1
ABC transporter related protein; COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR017871:IPR003439:IPR003593; KEGG: oan:Oant_2808 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Galactose/methyl galactoside import ATP-binding protein mglA; PFAM: ABC transporter.
 
 0.786
ADK82132.1
Periplasmic binding protein/LacI transcriptional regulator; COGs: COG1879 ABC-type sugar transport system periplasmic component; InterPro IPR001761; KEGG: gtn:GTNG_1813 D-ribose-binding periplasmic protein; PFAM: periplasmic binding protein/LacI transcriptional regulator; SPTR: D-ribose-binding periplasmic protein; PFAM: family.
 
 0.783
ADK80793.1
Periplasmic binding protein/LacI transcriptional regulator; COGs: COG1879 ABC-type sugar transport system periplasmic component; InterPro IPR001761:IPR002198; KEGG: gtn:GTNG_1813 D-ribose-binding periplasmic protein; PFAM: periplasmic binding protein/LacI transcriptional regulator; SPTR: D-ribose-binding periplasmic protein; PFAM: family.
 
 0.745
ADK80301.1
Periplasmic binding protein/LacI transcriptional regulator; COGs: COG1879 ABC-type sugar transport system periplasmic component; InterPro IPR001761; KEGG: rxy:Rxyl_1890 periplasmic binding protein/LacI transcriptional regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; SPTR: Periplasmic binding protein/LacI transcriptional regulator; PFAM: family.
 
 
 0.732
ADK80396.1
Inner-membrane translocator; COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: rhi:NGR_c17360 ribose ABC transporter, permease protein; PFAM: inner-membrane translocator; SPTR: Ribose ABC transporter, permease protein; PFAM: Branched-chain amino acid transport system / permease component.
 
    
0.690
ADK82548.1
Sugar ABC transporter (sugar-binding protein); COGs: COG1879 ABC-type sugar transport system periplasmic component; KEGG: gka:GK1896 sugar ABC transporter (sugar-binding protein); SPTR: Sugar ABC transporter (Sugar-binding protein); PFAM: family.
 
 0.681
ADK81190.1
Periplasmic binding protein/LacI transcriptional regulator; COGs: COG1879 ABC-type sugar transport system periplasmic component; InterPro IPR001761; KEGG: cce:Ccel_1642 periplasmic binding protein/LacI transcriptional regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; SPTR: Possible periplasmic binding protein/LacI transcriptional regulator; PFAM: family.
 
 0.650
ADK81812.1
Periplasmic binding protein/LacI transcriptional regulator; COGs: COG1879 ABC-type sugar transport system periplasmic component; InterPro IPR001761; KEGG: cac:CAC1453 ribose ABC transporter periplasmic ribose-binding protein; PFAM: periplasmic binding protein/LacI transcriptional regulator; SPTR: Periplasmic binding protein/LacI transcriptional regulator; PFAM: family.
 
 0.635
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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