STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK80458.1DegT/DnrJ/EryC1/StrS aminotransferase; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: bbr:BB0150 lipopolysaccharide biosynthesis protein; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: Strongly similar to Arnb transferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family. (398 aa)    
Predicted Functional Partners:
ADK80459.1
Polysaccharide biosynthesis protein CapD; COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR003869; KEGG: tde:TDE0714 capsular polysaccharide biosynthesis protein; PFAM: polysaccharide biosynthesis protein CapD; SPTR: Capsular polysaccharide biosynthesis protein; PFAM: Polysaccharide biosynthesis protein.
  
 0.998
ADK83305.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362:IPR017475; KEGG: cth:Cthe_1349 undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase; PRIAM: Undecaprenyl-phosphate galactose phosphotransferase; SPTR: Undecaprenyl-phosphate galactose phosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
 0.944
ADK83311.1
Undecaprenyl-phosphate glucose phosphotransferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362:IPR017473:IPR017475; KEGG: lic:LIC11459 UDP-glucosyltransferase; PFAM: sugar transferase; PRIAM: Undecaprenyl-phosphate galactose phosphotransferase; SPTR: Putative colanic biosynthesis UDP-glucose lipid carrier transferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase [...]
  
 0.943
ADK80455.1
Molybdopterin dehydrogenase FAD-binding protein; COGs: COG1319 Aerobic-type carbon monoxide dehydrogenase middle subunit CoxM/CutM homologs; InterPro IPR002346:IPR016166; KEGG: tde:TDE0728 FAD-binding protein, putative; PFAM: molybdopterin dehydrogenase FAD-binding; SPTR: Putative FAD-binding protein; PFAM: FAD binding domain in molybdopterin dehydrogenase.
  
    0.807
ADK80456.1
Ferredoxin; COGs: COG2080 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homologs; InterPro IPR006058:IPR001041:IPR002888; KEGG: tai:Taci_0194 (2Fe-2S)-binding domain protein; PFAM: ferredoxin; [2Fe-2S]-binding domain protein; SPTR: (2Fe-2S)-binding domain protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain.
       0.805
ADK80457.1
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein; COGs: COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL homologs; InterPro IPR000674:IPR008274; KEGG: tde:TDE0726 aldehyde oxidase and xanthine dehydrogenase family protein; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; SPTR: Aldehyde oxidase and xanthine dehydrogenase family protein; PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhe [...]
       0.795
ADK80460.1
NusG antitermination factor; InterPro IPR005825:IPR006645; KEGG: tde:TDE0713 NusG family transcription antitermination protein; PFAM: NGN domain protein; SPTR: Transcription antitermination protein, NusG family; PFAM: Transcription termination factor nusG.
       0.770
ADK79822.1
dTDP-glucose 4,6-dehydratase; COGs: COG1088 dTDP-D-glucose 4 6-dehydratase; InterPro IPR001509:IPR005888; KEGG: dap:Dacet_2762 dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
  
 0.765
ADK82034.1
Acylneuraminate cytidylyltransferase; COGs: COG1861 Spore coat polysaccharide biosynthesis protein F CMP-KDO synthetase homolog; InterPro IPR003329; KEGG: tpp:TPASS_0288 spore coat polysaccharide biosynthesis protein F; PFAM: acylneuraminate cytidylyltransferase; SPTR: Spore coat polysaccharide biosynthesis protein (SpsF); PFAM: Cytidylyltransferase.
 
  
 0.765
ADK82010.1
N-acetylneuraminic acid synthase domain protein; COGs: COG2089 Sialic acid synthase; InterPro IPR013132:IPR013974:IPR006190; KEGG: tde:TDE0960 NeuB family protein; PFAM: N-acetylneuraminic acid synthase domain; SAF domain protein; SPTR: NeuB family protein; PFAM: NeuB family.
 
  
 0.760
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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