STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK80523.1Extracellular solute-binding protein family 1; COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: csc:Csac_0126 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: Putative bacterial extracellular solute-binding protein; PFAM: Bacterial extracellular solute-binding protein. (442 aa)    
Predicted Functional Partners:
ADK80524.1
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: gym:GYMC10_2805 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Sugar ABC transporter permease; PFAM: Binding-protein-dependent transport system inner membrane component.
 
   0.944
ADK80525.1
COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: hor:Hore_13120 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Sugar ABC transporter permease; PFAM: Binding-protein-dependent transport system inner membrane component.
 
   0.938
ADK80527.1
ROK family protein; COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000835:IPR000600; KEGG: tpd:Teth39_2053 ROK family protein; PFAM: ROK family protein; regulatory protein MarR; SPTR: ROK family protein; PFAM: ROK family; MarR family.
 
  
 0.846
ADK81242.1
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: hor:Hore_13130 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Sugar ABC transporter permease; PFAM: Binding-protein-dependent transport system inner membrane component.
  
   0.810
ADK80876.1
Extracellular solute-binding protein family 1; COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: sro:Sros_2255 ABC-type sugar transport system periplasmic component-like protein; PFAM: extracellular solute-binding protein family 1; SPTR: ABC-type sugar transport system periplasmic component-like protein; PFAM: Bacterial extracellular solute-binding protein.
  
     0.731
ADK81241.1
COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: hor:Hore_13120 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Sugar ABC transporter permease; PFAM: Binding-protein-dependent transport system inner membrane component.
  
   0.713
cutC
CutC family protein; Participates in the control of copper homeostasis. Belongs to the CutC family.
       0.654
ADK82498.1
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: dde:Dde_3658 glucose transport system permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Glucose transport system permease protein; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 
 0.557
ADK79695.1
Binding-protein-dependent transport systems inner membrane component; COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: bbe:BBR47_13430 putative sugar ABC transporter permease; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport system inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.
  
   0.555
ADK83176.1
Extracellular solute-binding protein family 1; COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: gym:GYMC10_1298 extracellular solute-binding protein family 1; PFAM: extracellular solute-binding protein family 1; SPTR: Putative uncharacterized protein; PFAM: Bacterial extracellular solute-binding protein.
  
     0.549
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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