STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK80567.1InterPro IPR001296; KEGG: dol:Dole_2515 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1. (469 aa)    
Predicted Functional Partners:
ADK80566.1
Ribose-phosphate pyrophosphokinase; COGs: COG0462 Phosphoribosylpyrophosphate synthetase; InterPro IPR000836:IPR005946; KEGG: mmw:Mmwyl1_1169 ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; PRIAM: Ribose-phosphate diphosphokinase; SPTR: Ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase.
 
  
 0.797
ADK81070.1
Haloacid dehalogenase domain protein hydrolase; COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR005834; KEGG: dol:Dole_0492 hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: Haloacid dehalogenase domain protein hydrolase; PFAM: haloacid dehalogenase-like hydrolase.
  
 
 0.784
ADK82349.1
Glycosyl transferase family 2; InterPro IPR001173; KEGG: caa:Caka_1159 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2.
 
  
 0.765
ADK82348.1
Peptidase dimerization domain protein; COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR011650:IPR001261; KEGG: caa:Caka_1158 hypothetical protein; PFAM: peptidase dimerisation domain protein; SPTR: Putative uncharacterized protein; PFAM: Peptidase dimerisation domain.
  
  
 0.750
ADK79778.1
Alpha amylase catalytic region; COGs: COG0366 Glycosidase; InterPro IPR006047:IPR006589:IPR016377; KEGG: str:Sterm_1523 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: Putative sucrose phosphorylase; PFAM: Alpha amylase, catalytic domain.
 
 
 0.717
ADK80195.1
Extracellular solute-binding protein family 1; COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: kol:Kole_0811 extracellular solute-binding protein family 1; PFAM: extracellular solute-binding protein family 1; SPTR: Putative uncharacterized protein; PFAM: Bacterial extracellular solute-binding protein.
  
     0.641
ADK80565.1
MATE efflux family protein; COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: aoe:Clos_1966 MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; SPTR: MATE efflux family protein; TIGRFAM: MATE efflux family protein; PFAM: MatE; TIGRFAM: putative efflux protein, MATE family.
  
  
 0.596
ADK80197.1
COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: pmo:Pmob_0072 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Putative uncharacterized protein; PFAM: Binding-protein-dependent transport system inner membrane component.
 
     0.595
ADK80045.1
Sucrose phosphorylase; COGs: COG0366 Glycosidase; InterPro IPR006047:IPR006589:IPR016377; KEGG: dol:Dole_0651 sucrose phosphorylase; PFAM: alpha amylase catalytic region; PRIAM: Sucrose phosphorylase; SMART: alpha amylase catalytic sub domain; SPTR: Sucrose phosphorylase; PFAM: Alpha amylase, catalytic domain.
 
 
 0.587
ADK80562.1
COGs: COG0284 Orotidine-5'-phosphate decarboxylase; InterPro IPR001754:IPR011995; KEGG: tde:TDE2110 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; PRIAM: Orotidine-5'-phosphate decarboxylase; SPTR: Orotidine 5'-phosphate decarboxylase; TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 2.
   
 
 0.578
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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