STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK80569.1COGs: COG1454 Alcohol dehydrogenase class IV; InterPro IPR001670; KEGG: dth:DICTH_0069 alcohol dehydrogenase II; PFAM: iron-containing alcohol dehydrogenase; SPTR: Alcohol dehydrogenase II; PFAM: Iron-containing alcohol dehydrogenase. (393 aa)    
Predicted Functional Partners:
ADK79924.1
COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590:IPR016160:IPR012394; KEGG: dsy:DSY1102 hypothetical protein; PFAM: Aldehyde Dehydrogenase; SPTR: Putative uncharacterized protein; PFAM: Aldehyde dehydrogenase family.
 
 0.924
ADK81747.1
COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR016160:IPR015590; KEGG: ele:Elen_1838 aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; SPTR: Aldehyde dehydrogenase (NAD+); PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family.
 
 0.924
ADK81845.1
COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590; KEGG: bxe:Bxe_A3599 aldehyde dehydrogenase (acceptor); PFAM: Aldehyde Dehydrogenase; SPTR: Aldehyde dehydrogenase (Acceptor); PFAM: Aldehyde dehydrogenase family.
 
 0.924
ADK80568.1
COGs: COG0388 amidohydrolase; InterPro IPR003010; KEGG: pho:PH0642 hypothetical protein; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: Putative beta-ureidopropionase (Beta-alanine synthase) (N-carbamoyl-beta-alanine amidohydrolase) (PydC); PFAM: Carbon-nitrogen hydrolase.
  
    0.774
ADK79763.1
COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterProIPR002880:IPR019752:IPR019456:IPR001450:IPR 011766:IPR017900:IPR017896:IPR011895; KEGG: tde:TDE0665 pyruvate ferredoxin/flavodoxin oxidoreductase family protein; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase; Pyruvate-flavodoxin oxidoreductase, EKR domain; 4Fe-4S ferredoxin iron-sulfur binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; SPTR: Pyruvate ferredoxin/flavodoxin oxi [...]
  
  
 0.470
glgA
Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
  
 0.458
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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