STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK80590.1KEGG: rbi:RB2501_05130 hypothetical protein; SPTR: Putative uncharacterized protein. (219 aa)    
Predicted Functional Partners:
ADK80591.1
KEGG: ape:APE_0781.1 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function, DUF265.
       0.777
ADK79303.1
InterPro IPR001623; KEGG: tau:Tola_2364 heat shock protein DnaJ domain protein; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; SPTR: Heat shock protein DnaJ domain protein; PFAM: DnaJ domain.
  
     0.715
ADK81084.1
COGs: COG1864 DNA/RNA endonuclease G NUC1; InterPro IPR020821:IPR018524:IPR001604; KEGG: cts:Ctha_1807 DNA/RNA non-specific endonuclease; PFAM: DNA/RNA non-specific endonuclease; SMART: Extracellular Endonuclease, subunit A; SPTR: DNA/RNA non-specific endonuclease; PFAM: DNA/RNA non-specific endonuclease.
  
     0.579
ADK80901.1
KEGG: bth:BT_2899 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.572
ADK82909.1
Cell division protein FtsK/SpoIIIE; COGs: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related protein; InterPro IPR003593:IPR002543:IPR018541; KEGG: tde:TDE0173 FtsK/SpoIIIE family protein; PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SMART: AAA ATPase; SPTR: DNA translocase ftsk; PFAM: Ftsk gamma domain; FtsK/SpoIIIE family; Belongs to the FtsK/SpoIIIE/SftA family.
   
 
 0.561
trmH
tRNA/rRNA methyltransferase (SpoU); Catalyzes the 2'-O methylation of guanosine at position 18 in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.
  
     0.552
ADK80462.1
Sporulation domain protein; InterPro IPR007730; KEGG: tpp:TPASS_0433 acidic repeat protein; PFAM: Sporulation domain protein; SPTR: Acidic repeat protein; PFAM: Sporulation related domain.
  
 
 0.544
dapA-2
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
       0.538
ADK79192.1
KEGG: cvi:CV_4032 hypothetical protein; SPTR: Putative uncharacterized protein.
  
  
 0.526
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.520
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.