STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK80595.1Conserved hypothetical protein; COGs: COG4802 Ferredoxin-thioredoxin reductase catalytic subunit; KEGG: dol:Dole_2967 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Ferredoxin thioredoxin reductase catalytic beta chain. (110 aa)    
Predicted Functional Partners:
ADK80596.1
Glutaredoxin; InterPro IPR002109; KEGG: mth:MTH1577 hypothetical protein; PFAM: glutaredoxin; SPTR: Putative uncharacterized protein; PFAM: Glutaredoxin.
  
  
 0.827
ADK79174.1
Ferredoxin; COGs: COG0633 Ferredoxin; InterPro IPR001041; KEGG: lic:LIC12506 adenylate/guanylate cyclase; PFAM: ferredoxin; SPTR: Adenylate cyclase; PFAM: 2Fe-2S iron-sulfur cluster binding domain.
   
 
 0.747
ADK80599.1
InterPro IPR017937:IPR000866:IPR017936; KEGG: alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Cof-like hydrolase; PFAM: AhpC/TSA family.
   
 
 0.732
ADK80598.1
COGs: COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenase; InterPro IPR000262:IPR012133:IPR017934; KEGG: dvl:Dvul_0528 FMN-dependent alpha-hydroxy acid dehydrogenase; PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; SPTR: Dehydrogenase, FMN-dependent family; PFAM: FMN-dependent dehydrogenase.
 
     0.640
ADK82586.1
InterPro IPR000792; KEGG: sat:SYN_01476 LuxR family regulatory protein; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; SPTR: Bacterial regulatory protein, LuxR family; PFAM: Bacterial regulatory proteins, luxR family.
  
     0.618
ADK82995.1
COGs: COG4866 conserved hypothetical protein; InterPro IPR016732; KEGG: dat:HRM2_23720 hypothetical protein; PFAM: Uncharacterised conserved protein UCP018688; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized conserved protein (DUF2156).
  
     0.598
ADK80597.1
Hypothetical protein; KEGG: pfh:PFHG_01551 conserved hypothetical protein; SPTR: Chromosome 17 SCAF15006, whole genome shotgun sequence.
       0.580
ADK80600.1
COGs: COG1433 conserved hypothetical protein; InterPro IPR003731; KEGG: dsa:Desal_0066 dinitrogenase iron-molybdenum cofactor biosynthesis protein; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; SPTR: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; PFAM: Dinitrogenase iron-molybdenum cofactor.
       0.538
ADK82929.1
Methyltransferase type 11; InterPro IPR013216; KEGG: mmz:MmarC7_1469 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11; PFAM: Ribosomal RNA adenine dimethylase.
  
   
 0.499
ADK82595.1
SufBD protein; COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component; InterPro IPR000825; KEGG: gur:Gura_2451 SufBD protein; PFAM: SufBD protein; SPTR: SufBD protein; PFAM: Uncharacterized protein family (UPF0051).
 
   
 0.472
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.