STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK80607.1InterPro IPR006992; KEGG: cte:CT1115 hypothetical protein; PFAM: amidohydrolase 2; SPTR: Putative uncharacterized protein; PFAM: Amidohydrolase. (438 aa)    
Predicted Functional Partners:
glnS
COGs: COG0008 Glutamyl- and glutaminyl-tRNA synthetase; InterProIPR001412:IPR020060:IPR020058:IPR020059:IPR 004514; KEGG: cth:Cthe_0917 glutaminyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain; SPTR: Glutaminyl-tRNA synthetase; TIGRFAM: glutaminyl-tRNA synthetase; PFAM: tRNA synthetases class I (E and Q), catalytic domain; tRNA synthetases class I (E and Q), anti-codon binding domain; TIGRFAM: glutaminyl-tRNA synthetase.
       0.780
ADK80609.1
Diguanylate cyclase; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: dev:DhcVS_1162 GGDEF domain protein; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: GGDEF domain protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.
       0.561
ADK80610.1
ABC transporter related protein; COGs: COG4172 ABC-type uncharacterized transport system duplicated ATPase component; InterPro IPR017871:IPR003439:IPR013563:IPR003593; KEGG: pae:PA1807 ABC transporter ATP-binding protein; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; SPTR: Probable ATP-binding component of ABC transporter; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: phosphonate C-P lyase system protein PhnK; Belongs to the ABC transporter superfamily.
       0.516
ADK80611.1
Binding-protein-dependent transport systems inner membrane component; COGs: COG4239 ABC-type uncharacterized transport system permease component; InterPro IPR000515; KEGG: maq:Maqu_1540 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.
       0.516
ADK80612.1
Binding-protein-dependent transport systems inner membrane component; COGs: COG4174 ABC-type uncharacterized transport system permease component; InterPro IPR000515; KEGG: ddc:Dd586_2373 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.
       0.516
ADK80613.1
Extracellular solute-binding protein family 5; COGs: COG4166 ABC-type oligopeptide transport system periplasmic component; InterPro IPR000914; KEGG: hch:HCH_02522 ABC-type oligopeptide transport system, periplasmic component; PFAM: extracellular solute-binding protein family 5; SPTR: ABC-type oligopeptide transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle.
       0.516
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.