STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK80784.1COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: gym:GYMC10_1647 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component. (286 aa)    
Predicted Functional Partners:
ADK80785.1
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: cbe:Cbei_2358 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.
  0.992
ADK80786.1
Extracellular solute-binding protein family 1; COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: cbe:Cbei_2357 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: Extracellular solute-binding protein, family 1; PFAM: Bacterial extracellular solute-binding protein.
 
  0.985
ADK81764.1
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: gtn:GTNG_1793 L-arabinose transport system (permease); PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport system inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.
  0.968
ADK81765.1
Extracellular solute-binding protein family 1; COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: gtn:GTNG_1794 L-arabinose transport system (sugar-binding protein); PFAM: extracellular solute-binding protein family 1; SPTR: L-arabinose transport system (Sugar-binding protein); PFAM: Bacterial extracellular solute-binding protein.
  
  0.966
ADK79724.1
ABC transporter related protein; COGs: COG3839 ABC-type sugar transport systems ATPase components; InterPro IPR003593:IPR003439:IPR005116:IPR017871; KEGG: tma:TM1276 sugar ABC transporter, ATP-binding protein; PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase; SPTR: Multiple sugar-binding transport ATP-binding protein MsmK; PFAM: ABC transporter; TOBE domain.
 0.919
ADK81763.1
Binding-protein-dependent transport systems inner membrane component; COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: bld:BLi03022 AraQ; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: AraQ; PFAM: Binding-protein-dependent transport system inner membrane component.
  
  
 
0.905
ADK80911.1
ABC transporter related protein; COGs: COG3839 ABC-type sugar transport systems ATPase components; InterPro IPR003439:IPR013611:IPR017871:IPR003593; KEGG: tpe:Tpen_1165 ABC transporter related; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; SPTR: Putative uncharacterized protein; PFAM: ABC transporter; TOBE domain.
 
 0.902
ADK80980.1
ABC transporter related protein; COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR003593:IPR017871:IPR003439:IPR013611; KEGG: pjd:Pjdr2_0286 ABC transporter related; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; SPTR: Putative uncharacterized protein; PFAM: ABC transporter; TOBE domain.
 
 0.902
ADK82721.1
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: hau:Haur_1151 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.
   0.843
ADK79776.1
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: cju:C8J_1586 hypothetical protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.
   0.841
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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