STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK80857.1Peptidase M23; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR018392:IPR016047; KEGG: tde:TDE1738 M23/M37 peptidase domain-containing protein; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SPTR: M23/M37 peptidase domain protein; PFAM: Peptidase family M23. (302 aa)    
Predicted Functional Partners:
ADK80856.1
PEGA domain protein; InterPro IPR013229; KEGG: tga:TGAM_1390 amylopullulanase related protein (Apu); PFAM: PEGA domain protein; SPTR: Putative uncharacterized protein.
       0.796
ADK80859.1
TPR repeat-containing protein; InterPro IPR001440:IPR019734:IPR013026; KEGG: gur:Gura_1893 TPR repeat-containing protein; PFAM: TPR repeat-containing protein; SPTR: Tetratricopeptide TPR_2 repeat protein.
       0.790
ADK80860.1
Mammalian cell entry related domain protein; COGs: COG1463 ABC-type transport system involved in resistance to organic solvents periplasmic component; InterPro IPR003399; KEGG: cts:Ctha_2172 mammalian cell entry related domain protein; PFAM: Mammalian cell entry related domain protein; SPTR: Mammalian cell entry related domain protein; PFAM: mce related protein.
       0.790
ADK80858.1
Hypothetical protein; KEGG: sds:SDEG_0896 xanthine permease; SPTR: Putative uncharacterized protein.
       0.773
ADK80854.1
Penicillin-binding protein, 1A family; COGs: COG5009 Membrane carboxypeptidase/penicillin-binding protein; InterPro IPR011816:IPR001264:IPR001460; KEGG: bre:BRE_738 penicillin-binding protein; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Penicillin-binding protein; TIGRFAM: penicillin-binding protein, 1A family; PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein, 1A family.
 
   
 0.670
ADK80703.1
Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
  
 
 0.667
ADK80861.1
ABC transporter related protein; COGs: COG1135 ABC-type metal ion transport system ATPase component; InterPro IPR003439:IPR017871:IPR000408:IPR003593; KEGG: chy:CHY_0167 cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Predicted ATPase involved in cell division; PFAM: ABC transporter.
       0.624
ADK80862.1
Protein of unknown function DUF140; COGs: COG0767 ABC-type transport system involved in resistance to organic solvents permease component; InterPro IPR003453; KEGG: cts:Ctha_2170 protein of unknown function DUF140; PFAM: protein of unknown function DUF140; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein.
       0.616
ADK80864.1
Putative transcriptional regulator, Crp/Fnr family; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR002373:IPR000595:IPR018488; KEGG: tde:TDE2616 cyclic nucleotide-binding protein; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; SPTR: Cyclic nucleotide-binding protein; PFAM: Cyclic nucleotide-binding domain.
 
    0.557
ADK81355.1
Peptidase M23; COGs: COG4942 Membrane-bound metallopeptidase; InterPro IPR002482:IPR018392:IPR016047; KEGG: tde:TDE1297 LysM/M23/M37 peptidase; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; SPTR: LysM domain/M23/M37 peptidase domain protein; PFAM: Peptidase family M23; LysM domain.
 
   
 0.519
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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