STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK80892.1Hypothetical protein; KEGG: lif:LinJ14.1210 kinesin K39; SPTR: Kinesin K39, putative. (3165 aa)    
Predicted Functional Partners:
ADK80893.1
KEGG: tde:TDE1705 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.780
ADK80703.1
Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
   
 
 0.624
ADK80888.1
Efflux transporter, RND family, MFP subunit; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143:IPR003997:IPR005479; KEGG: lbl:LBL_0963 membrane efflux protein; PFAM: secretion protein HlyD family protein; SPTR: Membrane efflux protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
     
 0.500
ADK80889.1
COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: lic:LIC10496 hypothetical protein; PFAM: outer membrane efflux protein; SPTR: Putative uncharacterized protein; PFAM: Outer membrane efflux protein.
     
 0.500
ADK80891.1
TPR repeat-containing protein; COGs: COG4783 Putative Zn-dependent protease contains TPR repeats; InterPro IPR001440:IPR019734:IPR013026; KEGG: rca:Rcas_0215 TPR repeat-containing protein; PFAM: TPR repeat-containing protein; SPTR: Tetratricopeptide TPR_2 repeat protein.
     
 0.484
ADK80890.1
Hypothetical protein; KEGG: tte:TTE1035 methylesterase CheB/methylase CheR; SPTR: ABC superfamily ATP binding cassette transporter ABC protein.
       0.480
ADK80887.1
KEGG: lbl:LBL_0959 hypothetical protein; SPTR: Putative uncharacterized protein.
     
 0.408
ADK80886.1
KEGG: lbl:LBL_0958 lipoprotein; SPTR: Conserved hypothetical lipoprotein.
  
  
 0.406
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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