STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK80909.1COGs: COG1840 ABC-type Fe3+ transport system periplasmic component; KEGG: sro:Sros_5559 ABC transporter periplasmic substrate-binding protein; SPTR: Putative uncharacterized protein; PFAM: Bacterial extracellular solute-binding protein. (382 aa)    
Predicted Functional Partners:
ADK80910.1
COGs: COG1178 ABC-type Fe3+ transport system permease component; InterPro IPR000515; KEGG: cpy:Cphy_2143 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Putative uncharacterized protein; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 
 0.987
ADK80979.1
Binding-protein-dependent transport systems inner membrane component; COGs: COG1178 ABC-type Fe3+ transport system permease component; InterPro IPR001917:IPR000515; KEGG: pjd:Pjdr2_0285 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Putative uncharacterized protein; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 
 0.970
ADK80965.1
LysR substrate-binding protein; COGs: COG1840 ABC-type Fe3+ transport system periplasmic component; InterPro IPR005119; KEGG: bhy:BHWA1_00868 periplasmic-iron-binding protein BitB; PFAM: LysR substrate-binding; SPTR: Periplasmic-iron-binding protein BitB; PFAM: Bacterial extracellular solute-binding protein.
  
  
  0.937
ADK80966.1
Binding-protein-dependent transport systems inner membrane component; COGs: COG1178 ABC-type Fe3+ transport system permease component; InterPro IPR000515; KEGG: sth:STH1155 ABC transporter permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: ABC transporter permease protein; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 
 0.935
ADK80981.1
Extracellular solute-binding protein family 1; COGs: COG1840 ABC-type Fe3+ transport system periplasmic component; KEGG: pjd:Pjdr2_0284 extracellular solute-binding protein family 1; SPTR: Extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding protein.
  
  
 
0.925
ADK83041.1
Extracellular solute-binding protein family 1; COGs: COG1840 ABC-type Fe3+ transport system periplasmic component; InterPro IPR006059; KEGG: kol:Kole_1985 extracellular solute-binding protein family 1; PFAM: extracellular solute-binding protein family 1; SPTR: Extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding protein.
  
  
  0.912
ADK80971.1
Extracellular solute-binding protein family 1; COGs: COG1840 ABC-type Fe3+ transport system periplasmic component; InterPro IPR006059; KEGG: sth:STH3219 iron ABC transporter substrate-binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: Iron(III) dicitrate transport ATP-binding protein FecE; PFAM: Bacterial extracellular solute-binding protein.
  
  
  0.911
ADK80972.1
Binding-protein-dependent transport systems inner membrane component; COGs: COG1178 ABC-type Fe3+ transport system permease component; InterPro IPR000515; KEGG: sth:STH3218 ABC transporter permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: ABC transporter permease protein; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 
 0.899
ADK83042.1
COGs: COG1178 ABC-type Fe3+ transport system permease component; InterPro IPR000515; KEGG: kol:Kole_1984 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 
 0.899
ADK80967.1
ABC transporter related protein; COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR003593:IPR017871:IPR003439; KEGG: sfu:Sfum_3496 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related; PFAM: ABC transporter; Belongs to the ABC transporter superfamily.
  
 
 0.854
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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