STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK81112.1InterPro IPR013838; KEGG: avi:Avi_6187 hypothetical protein; SPTR: Putative uncharacterized protein. (140 aa)    
Predicted Functional Partners:
ADK81111.1
COGs: COG4653 phage phi-C31 gp36 major capsid-like protein; InterPro IPR006444; KEGG: avi:Avi_1338 phage major capsid protein HK97 family; PFAM: major capsid protein HK97; SPTR: Phage major capsid protein HK97 family; TIGRFAM: phage major capsid protein, HK97 family; PFAM: Phage capsid family; TIGRFAM: phage major capsid protein, HK97 family.
       0.746
ADK81109.1
Phage portal protein, HK97 family; COGs: COG4695 Phage-related protein; InterPro IPR006944:IPR006427; KEGG: spa:M6_Spy1140 portal protein; PFAM: portal protein; SPTR: Phage portal protein, HK97 family; TIGRFAM: phage portal protein, HK97 family; PFAM: Phage portal protein; TIGRFAM: phage portal protein, HK97 family.
       0.745
ADK81108.1
Terminase; COGs: COG4626 Phage terminase-like protein large subunit; InterPro IPR005021; KEGG: pag:PLES_25381 terminase; PFAM: Terminase; SPTR: Terminase; PFAM: Phage Terminase.
       0.742
ADK81107.1
Phage terminase, small subunit, P27 family; COGs: COG3747 Phage terminase small subunit; InterPro IPR006448; KEGG: spa:M6_Spy1142 phage terminase small subunit; PFAM: terminase small subunit putative P27; SPTR: Phage Terminase Small Subunit; TIGRFAM: phage terminase, small subunit, P27 family; PFAM: Phage terminase, small subunit; TIGRFAM: phage terminase, small subunit, putative, P27 family.
       0.738
ADK81110.1
Peptidase S14 ClpP; COGs: COG0740 Protease subunit of ATP-dependent Clp protease; InterPro IPR001907; KEGG: eck:EC55989_1063 putative ATP-dependent Clp protease proteolytic subunit (endopeptidase Clp) of prophage; PFAM: peptidase S14 ClpP; SPTR: ATP-dependent Clp protease proteolytic subunit; PFAM: Clp protease; Belongs to the peptidase S14 family.
       0.737
ADK81106.1
Hypothetical protein; KEGG: dvu:DVU1505 holin, putative; SPTR: Holin, putative.
       0.727
ADK81113.1
Hypothetical protein; KEGG: ngk:NGK_1435 putative phage associated protein; SPTR: Putative uncharacterized protein; TIGRFAM: phage conserved hypothetical protein, phiE125 gp8 family.
       0.556
ADK81114.1
KEGG: mba:Mbar_A3399 hypothetical protein; SPTR: Phage protein, HK97 gp10 family; PFAM: Bacteriophage protein of unknown function (DUF646).
       0.556
ADK81115.1
Hypothetical protein; KEGG: ech:ECH_1012 DNA-binding response regulator; SPTR: Putative response regulator component of a two-component regulatory system.
       0.556
ADK81116.1
Hypothetical protein; KEGG: npu:Npun_F4869 putative outer membrane adhesin like proteiin; SPTR: FG-GAP repeat protein.
       0.556
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.