STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK81121.1Hypothetical protein; KEGG: bam:Bamb_1861 bacteriophage-acquired protein; SPTR: Bacteriophage-acquired protein. (203 aa)    
Predicted Functional Partners:
ADK81118.1
KEGG: cwo:Cwoe_2446 hypothetical protein.
       0.773
ADK81119.1
Hypothetical protein; KEGG: cth:Cthe_1709 phage-related protein-like protein; SPTR: Putative uncharacterized protein.
       0.773
ADK81120.1
KEGG: baf:BAPKO_5508 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
ADK81122.1
KEGG: tva:TVAG_483670 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
ADK81123.1
Hypothetical protein; KEGG: bdu:BDU_12007 BppB; SPTR: BppB; PFAM: Protein of unknown function, DUF261.
       0.773
ADK81124.1
Hypothetical protein; KEGG: cel:C11D2.6 Novel Channel type/putative Nematode CAlcium channel; SPTR: Uncoordinated protein 77, isoform c, partially confirmed by transcript evidence.
       0.773
ADK81125.1
Hypothetical protein; KEGG: ptr:463470 CAP-GLY domain containing linker protein 2; SPTR: CAP-GLY domain containing linker protein 2.
       0.773
ADK81113.1
Hypothetical protein; KEGG: ngk:NGK_1435 putative phage associated protein; SPTR: Putative uncharacterized protein; TIGRFAM: phage conserved hypothetical protein, phiE125 gp8 family.
       0.709
ADK81114.1
KEGG: mba:Mbar_A3399 hypothetical protein; SPTR: Phage protein, HK97 gp10 family; PFAM: Bacteriophage protein of unknown function (DUF646).
       0.709
ADK81115.1
Hypothetical protein; KEGG: ech:ECH_1012 DNA-binding response regulator; SPTR: Putative response regulator component of a two-component regulatory system.
       0.709
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.