STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK81233.1COGs: COG3920 Signal transduction histidine kinase; InterPro IPR003594:IPR005467:IPR011495; KEGG: cya:CYA_2886 sensory box histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; SMART: ATP-binding region ATPase domain protein; SPTR: Sensory box histidine kinase; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (569 aa)    
Predicted Functional Partners:
ADK82981.1
COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: azl:AZL_b02970 two-component hybrid sensor and regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Two-component hybrid sensor and regulator; PFAM: Response regulator receiver domain.
 
   
 0.772
ADK81438.1
Inner-membrane translocator; COGs: COG4120 ABC-type uncharacterized transport system permease component; InterPro IPR001851; KEGG: dat:HRM2_37770 ABC-type transporter, permease component; PFAM: inner-membrane translocator; SPTR: ABC-type transporter, permease component; PFAM: Branched-chain amino acid transport system / permease component.
  
    0.767
ADK81232.1
COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789; KEGG: lbf:LBF_2370 signal transduction histidine kinase; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Putative two-component response regulator; PFAM: Response regulator receiver domain.
     0.765
ADK80950.1
COGs: COG4585 Signal transduction histidine kinase; InterProIPR000014:IPR001789:IPR013767:IPR011712:IPR 003594:IPR019775:IPR005467:IPR000700; KEGG: sru:SRU_0678 sensor protein FixL; PFAM: response regulator receiver; PAS fold domain protein; histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: response regulator receiver; PAS domain containing protein; ATP-binding region ATPase domain protein; SPTR: Sensor protein fixL; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Resp [...]
   
 0.735
ADK81234.1
COGs: COG2746 Aminoglycoside N3'-acetyltransferase; InterPro IPR003679; KEGG: gym:GYMC10_5436 aminoglycoside N(3')-acetyltransferase; PFAM: aminoglycoside 3-N-acetyltransferase; PRIAM: Aminoglycoside N(3')-acetyltransferase; SPTR: Aminoglycoside N(3')-acetyltransferase; PFAM: Aminoglycoside 3-N-acetyltransferase.
       0.631
ADK80486.1
COGs: COG3920 Signal transduction histidine kinase; InterPro IPR004010:IPR003660:IPR011495; KEGG: dvl:Dvul_0613 putative PAS/PAC sensor protein; PFAM: histidine kinase dimerisation/phosphoacceptor; histidine kinase HAMP region domain protein; Cache domain protein; SMART: histidine kinase HAMP region domain protein; SPTR: Sensor protein; PFAM: Histidine kinase; Cache domain; HAMP domain.
 
    
0.471
ADK81235.1
InterPro IPR000835:IPR000182; KEGG: mab:MAB_1138c MarR family transcriptional regulator; PFAM: GCN5-related N-acetyltransferase; regulatory protein MarR; SMART: regulatory protein MarR; SPTR: Putative transcriptional regulator, MarR family; PFAM: MarR family; Acetyltransferase (GNAT) family.
     
 0.450
ADK82627.1
COGs: COG3920 Signal transduction histidine kinase; InterProIPR001789:IPR000014:IPR001610:IPR013655:IPR 013767:IPR011495:IPR003594:IPR005467:IPR000700:IPR001385; KEGG: cyn:Cyan7425_4138 signal transduction histidine kinase; PFAM: PAS fold-3 domain protein; response regulator receiver; PAS fold domain protein; histidine kinase dimerisation/phosphoacceptor; ATP-binding region ATPase domain protein; SMART: response regulator receiver; PAS domain containing protein; PAC repeat-containing protein; SPTR: Signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Histidine kinas [...]
 
   
0.447
ADK82493.1
COGs: COG3920 Signal transduction histidine kinase; InterProIPR001789:IPR000014:IPR013655:IPR003594:IPR 000700; KEGG: lbf:LBF_2370 signal transduction histidine kinase; PFAM: response regulator receiver; PAS fold-3 domain protein; ATP-binding region ATPase domain protein; SMART: response regulator receiver; PAS domain containing protein; SPTR: Putative two-component response regulator; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase; Response regulator receiver domain; PAS fold; TIGRFAM: PAS domain S-box.
 
   
0.437
ADK80576.1
COGs: COG2200 FOG: EAL domain; InterProIPR001789:IPR013767:IPR000160:IPR001633:IPR 000014; KEGG: tgr:Tgr7_1990 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); PFAM: EAL domain protein; GGDEF domain containing protein; response regulator receiver; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; response regulator receiver; PAS domain containing protein; SPTR: Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain; GGDEF domain [...]
   
 0.432
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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