STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK81246.1Protein of unknown function DUF434; COGs: COG2454 conserved hypothetical protein; InterPro IPR007368; KEGG: cac:CAC1606 hypothetical protein; PFAM: protein of unknown function DUF434; SPTR: Uncharacterized conserved protein; PFAM: Protein of unknown function (DUF434). (228 aa)    
Predicted Functional Partners:
ADK81247.1
Oxidoreductase domain protein; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683; KEGG: lbf:LBF_1699 oxidoreductase, NAD-binding; PFAM: oxidoreductase domain protein; SPTR: Putative glucose-fructose oxidoreductase; PFAM: Oxidoreductase family, NAD-binding Rossmann fold.
       0.773
ADK81248.1
KEGG: rrs:RoseRS_2062 hypothetical protein; SPTR: Transcriptional regulator.
       0.773
ADK81245.1
Heat shock protein DnaJ domain protein; COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; InterPro IPR003095:IPR001623; KEGG: mgm:Mmc1_0565 heat shock protein DnaJ domain-containing protein; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; SPTR: Heat shock protein DnaJ domain protein; PFAM: DnaJ domain; DNA-J related protein.
       0.556
ADK81244.1
ROK family protein; COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: xylR; xylose repressor; PFAM: ROK family protein; SPTR: Xylose repressor; PFAM: ROK family.
       0.421
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.