STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK81390.1AMMECR1 domain protein; COGs: COG2078 conserved hypothetical protein; InterPro IPR002733; KEGG: drt:Dret_0462 AMMECR1 domain protein; PFAM: AMMECR1 domain protein; SPTR: AMMECR1 domain protein; PFAM: AMMECR1; TIGRFAM: conserved hypothetical protein TIGR00296. (178 aa)    
Predicted Functional Partners:
ADK81657.1
Radical SAM domain protein; COGs: COG1180 Pyruvate-formate lyase-activating enzyme; InterPro IPR007197:IPR016431; KEGG: kol:Kole_1694 radical SAM domain protein; PFAM: Radical SAM domain protein; SPTR: Radical SAM domain protein; manually curated; PFAM: Radical SAM superfamily.
     0.932
ADK81058.1
Protein of unknown function DUF52; COGs: COG1355 dioxygenase; InterPro IPR002737; KEGG: dal:Dalk_4100 protein of unknown function DUF52; PFAM: protein of unknown function DUF52; SPTR: Putative uncharacterized protein; PFAM: Memo-like protein.
 
    0.842
hisD
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
  
    0.820
ADK81388.1
Appr-1-p processing domain protein; COGs: COG2110 phosphatase homologous to the C-terminal domain of histone macroH2A1; InterPro IPR001969:IPR002589; KEGG: ent:Ent638_1561 hypothetical protein; PFAM: Appr-1-p processing domain protein; SMART: Appr-1-p processing domain protein; SPTR: Appr-1-p processing domain protein; PFAM: Macro domain.
       0.787
ADK81386.1
FolC bifunctional protein; COGs: COG0285 Folylpolyglutamate synthase; InterPro IPR018109:IPR013221:IPR004101:IPR001645; KEGG: tde:TDE1084 folylpolyglutamate synthetase, putative; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; SPTR: Folylpolyglutamate synthetase, putative; TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase.
  
    0.786
ADK81389.1
COGs: COG1293 RNA-binding protein homologous to eukaryotic snRNP; InterPro IPR008616:IPR008532; KEGG: tde:TDE1579 fibronectin/fibrinogen-binding protein, internal deletion; PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; SPTR: Fibronectin/fibrinogen-binding protein, internal deletion; PFAM: Domain of unknown function (DUF814); Fibronectin-binding protein A N-terminus (FbpA).
       0.784
hisC
COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; InterPro IPR004839:IPR005861; KEGG: sat:SYN_01517 histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; SPTR: Histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
       0.778
ADK81391.1
KEGG: osa:4332665 hypothetical protein; SPTR: Acyltransferase family protein.
       0.751
ADK81384.1
COGs: COG2935 Putative arginyl-tRNA:protein arginylyltransferase; InterPro IPR007471:IPR007472; KEGG: mca:MCA1791 arginyl-tRNA-protein transferase; PFAM: Arginine-tRNA-protein transferase domain protein; SPTR: Putative uncharacterized protein; PFAM: Arginine-tRNA-protein transferase, C terminus; Arginine-tRNA-protein transferase, N terminus.
       0.548
ADK82416.1
Conserved hypothetical protein; COGs: COG1355 dioxygenase; KEGG: tde:TDE2539 hypothetical protein; SPTR: Conserved domain protein; PFAM: Memo-like protein.
 
    0.475
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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