STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK81661.1Transcriptional regulator, LuxR family; InterPro IPR000792; KEGG: chu:CHU_1181 response regulator, positive activator of UhpT transcription; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; SPTR: Response regulator, positive activator of uhpT transcription; PFAM: Bacterial regulatory proteins, luxR family. (290 aa)    
Predicted Functional Partners:
ADK80817.1
COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR004358:IPR017442:IPR003018:IPR003661:IPR 003594:IPR008266:IPR020635:IPR002290:IPR000719:IPR005467; KEGG: npu:Npun_R2272 multi-sensor signal transduction multi-kinase; PFAM: ATP-binding region ATPase domain protein; Serine/threonine-protein kinase-like domain; GAF domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain; GAF domain protein; histidine kina [...]
  
 
 0.721
ADK81660.1
COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: gme:Gmet_1507 beta-lactamase; PFAM: beta-lactamase; SPTR: Beta-lactamase; PFAM: Beta-lactamase.
       0.509
ADK79613.1
Beta-lactamase domain protein; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: dap:Dacet_1446 beta-lactamase domain protein; SPTR: Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily.
    
 
 0.501
ADK81583.1
Conserved hypothetical protein; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: tde:TDE1229 hypothetical protein; SPTR: GloB protein; PFAM: Metallo-beta-lactamase superfamily.
    
 
 0.501
ADK81792.1
KEGG: rxy:Rxyl_2378 beta-lactamase-like protein; SPTR: Beta-lactamase-like protein; PFAM: Metallo-beta-lactamase superfamily.
    
 
 0.501
ADK81930.1
Beta-lactamase; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: lbf:LBF_0939 Zn-dependent hydrolase; PRIAM: Beta-lactamase; SPTR: Metallo-b-lactamase; PFAM: Metallo-beta-lactamase superfamily.
    
 
 0.501
ADK83246.1
Beta-lactamase domain-containing protein; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: ppd:Ppro_2620 beta-lactamase domain-containing protein; SPTR: Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily.
    
 
 0.501
ADK81659.1
Hypothetical protein; KEGG: cpv:cgd3_770 ULP1 like protease with a chlamydin like cysteine protease domain; SPTR: ULP1 like protease with a chlamydin like cysteine protease domain.
       0.497
ADK81340.1
Transcriptional regulator, LuxR family; InterPro IPR000792:IPR013767; KEGG: rec:RHECIAT_CH0000671 putative transcriptional regulator protein, LuxR family; PFAM: regulatory protein LuxR; PAS fold domain protein; SMART: regulatory protein LuxR; SPTR: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Bacterial regulatory proteins, luxR family; PAS fold; TIGRFAM: PAS domain S-box.
 
 
 0.488
ADK81810.1
Two component transcriptional regulator, LuxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789:IPR000792; KEGG: ssa:SSA_0217 two-component response transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; SPTR: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
 
 
 0.468
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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