STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK81742.1FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COGs: COG0446 NAD(FAD)-dependent dehydrogenase; InterPro IPR001455:IPR013027:IPR004099:IPR001763; KEGG: pdi:BDI_0541 pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; Rhodanese domain protein; SirA family protein; SMART: Rhodanese domain protein; SPTR: Putative uncharacterized protein; PFAM: Pyridine nucleotide-disulphide oxidoreductase; SirA-like protein; Pyridine nucleotide-disulphide oxidoreduct [...] (829 aa)    
Predicted Functional Partners:
rpmE
Ribosomal protein L31; Binds the 23S rRNA.
  
  
 0.931
ADK82594.1
COGs: COG0307 Riboflavin synthase alpha chain; InterPro IPR001783; KEGG: sul:SYO3AOP1_0177 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein; PRIAM: Riboflavin synthase; SPTR: Riboflavin synthase, alpha subunit; PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit.
  
    0.927
ADK79215.1
Inner-membrane translocator; COGs: COG4158 ABC-type sugar transport system permease component; InterPro IPR001851; KEGG: npu:Npun_R5324 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component.
   
    0.925
metAA
Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.
  
    0.921
ADK79805.1
Manganese/iron superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
 
 0.889
ADK79613.1
Beta-lactamase domain protein; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: dap:Dacet_1446 beta-lactamase domain protein; SPTR: Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily.
  
 0.869
ADK81583.1
Conserved hypothetical protein; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: tde:TDE1229 hypothetical protein; SPTR: GloB protein; PFAM: Metallo-beta-lactamase superfamily.
  
 0.869
ADK81792.1
KEGG: rxy:Rxyl_2378 beta-lactamase-like protein; SPTR: Beta-lactamase-like protein; PFAM: Metallo-beta-lactamase superfamily.
  
 0.869
ADK81930.1
Beta-lactamase; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: lbf:LBF_0939 Zn-dependent hydrolase; PRIAM: Beta-lactamase; SPTR: Metallo-b-lactamase; PFAM: Metallo-beta-lactamase superfamily.
  
 0.869
ADK83246.1
Beta-lactamase domain-containing protein; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: ppd:Ppro_2620 beta-lactamase domain-containing protein; SPTR: Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily.
  
 0.869
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.