STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK81782.1Transcriptional regulator, LacI family; COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR001761; KEGG: cpo:COPRO5265_1470 catabolite control protein A (glucose-resistance amylase regulator); PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; SPTR: Catabolite control protein A (Glucose-resistance amylase regulator); PFAM: Bacterial regulatory proteins, lacI family; family. (346 aa)    
Predicted Functional Partners:
ADK81337.1
Transcriptional regulator, LacI family; COGs: COG1609 Transcriptional regulators; InterPro IPR000843; KEGG: tte:TTE0201 transcriptional regulator; PFAM: regulatory protein LacI; SMART: regulatory protein LacI; SPTR: Putative uncharacterized protein; PFAM: Bacterial regulatory proteins, lacI family; family.
  
     0.774
ADK79212.1
Transcriptional regulator, GntR family with LacI sensor; COGs: COG1609 Transcriptional regulators; InterPro IPR000524:IPR001761; KEGG: aca:ACP_0022 transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein GntR HTH; SPTR: Transcriptional regulator, GntR family; PFAM: Bacterial regulatory proteins, gntR family; family.
  
     0.758
ADK80964.1
Transcriptional regulator, GntR family with LacI sensor; COGs: COG1609 Transcriptional regulators; InterPro IPR000524:IPR001761; KEGG: pjd:Pjdr2_0522 transcriptional regulator, GntR family with LacI sensor; PFAM: regulatory protein GntR HTH; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein GntR HTH; SPTR: Transcriptional regulator, GntR family with LacI sensor; PFAM: Bacterial regulatory proteins, gntR family; family.
  
     0.733
ADK81442.1
COGs: COG0069 Glutamate synthase domain 2; InterProIPR000583:IPR006982:IPR002932:IPR002489:IPR 017932; KEGG: sus:Acid_3816 glutamate synthase (NADH) large subunit; PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein; PRIAM: Glutamate synthase (ferredoxin); SPTR: Glutamate synthase (NADH) large subunit; PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II.
    
 
 0.682
ADK82517.1
Transcriptional regulator, LacI family; COGs: COG1609 Transcriptional regulators; InterPro IPR000843; KEGG: dfe:Dfer_4879 transcriptional regulator, LacI family; PFAM: regulatory protein LacI; SMART: regulatory protein LacI; SPTR: Transcriptional regulator, LacI family; PFAM: Bacterial regulatory proteins, lacI family.
  
     0.674
ADK81781.1
KEGG: hor:Hore_19200 pyrimidine reductase, riboflavin biosynthesis; SPTR: Putative uncharacterized protein.
       0.625
ADK81779.1
Major facilitator superfamily MFS_1; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701; KEGG: dau:Daud_2034 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily.
     
 0.579
ADK81780.1
Amidohydrolase; COGs: COG0402 Cytosine deaminase and related metal-dependent hydrolase; InterPro IPR013838:IPR006680; KEGG: cdl:CDR20291_1989 putative amidohydrolase; PFAM: amidohydrolase; SPTR: Putative uncharacterized protein; PFAM: Amidohydrolase family.
       0.573
ADK81805.1
COGs: COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component); InterProIPR001020:IPR000121:IPR004701:IPR005698:IPR 008731:IPR008279:IPR012844:IPR006318:IPR000032; KEGG: rca:Rcas_2048 phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; PTS system fructose subfamily IIA component; phosphoryl transfer system HPr; PEP-utilising protein mobile region; SPTR: Phosphoenolpyruvate-protein phosphotransferase; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; dihydroxyacetone kinase, phosphotransfer subunit; phosph [...]
   
 
 0.545
ADK80243.1
Transcriptional regulator, LacI family; COGs: COG1879 ABC-type sugar transport system periplasmic component; InterPro IPR000843; KEGG: aba:Acid345_0908 LacI family transcription regulator; PFAM: regulatory protein LacI; SMART: regulatory protein LacI; SPTR: Transcriptional regulator, LacI family; PFAM: Bacterial regulatory proteins, lacI family.
  
    0.533
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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