STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK81789.1ABC transporter related protein; COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR017871:IPR003439:IPR003593; KEGG: gym:GYMC10_3889 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Putative uncharacterized protein; PFAM: ABC transporter. (501 aa)    
Predicted Functional Partners:
ADK81788.1
Inner-membrane translocator; COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: cdl:CDR20291_0305 ribose ABC transporter, permease protein; PFAM: inner-membrane translocator; SPTR: Ribose ABC transporter, permease protein; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.840
ADK82535.1
ABC-2 type transporter; COGs: COG0842 ABC-type multidrug transport system permease component; InterPro IPR013525:IPR013526:IPR000412; KEGG: dol:Dole_0810 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: ABC-2 type transporter; PFAM: ABC-2 type transporter; TIGRFAM: ABC transporter efflux protein, DrrB family.
 
    
 0.673
ADK81790.1
Ribose ABC transporter, substrate binding protein; COGs: COG1879 ABC-type sugar transport system periplasmic component; KEGG: cvi:CV_3016 ribose ABC transporter, substrate binding protein; SPTR: Putative uncharacterized protein; PFAM: family.
  
 
 0.652
ADK79501.1
Inner-membrane translocator; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: dat:HRM2_02770 LivM1; PFAM: inner-membrane translocator; SPTR: LivM1; PFAM: Branched-chain amino acid transport system / permease component.
    
 0.641
ADK82130.1
Inner-membrane translocator; COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: clo:HMPREF0868_0027 amino acid or sugar ABC transport system, permease protein; PFAM: inner-membrane translocator; SPTR: Ribose transport system permease protein RbsC; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.560
ADK79971.1
Inner-membrane translocator; COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: oih:OB2573 ribose ABC transporter permease; PFAM: inner-membrane translocator; SPTR: Putative uncharacterized protein; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.509
ADK82546.1
Inner-membrane translocator; COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: gka:GK1893 sugar ABC transporter (permease); PFAM: inner-membrane translocator; SPTR: Monosaccharide-transporting ATPase; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.507
ADK81189.1
Inner-membrane translocator; COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR007382:IPR001851; KEGG: dfe:Dfer_3165 monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; SPTR: Monosaccharide-transporting ATPase; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.481
ADK82704.1
Inner-membrane translocator; COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: lhk:LHK_01713 RbsC; PFAM: inner-membrane translocator; SPTR: Putative uncharacterized protein; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.475
ADK80299.1
Inner-membrane translocator; COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: rxy:Rxyl_1889 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.454
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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