STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK81809.1Extracellular solute-binding protein family 1; COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: cac:CAC1456 sugar-binding periplasmic protein; PFAM: extracellular solute-binding protein family 1; SPTR: Putative uncharacterized protein; PFAM: Bacterial extracellular solute-binding protein. (435 aa)    
Predicted Functional Partners:
ADK81811.1
COGs: COG4585 Signal transduction histidine kinase; InterPro IPR011712:IPR003594; KEGG: cac:CAC1454 membrane associated histidine kinase-like ATPase; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SPTR: Membrane associated histidine kinase-like ATPase; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
    0.946
ADK81810.1
Two component transcriptional regulator, LuxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789:IPR000792; KEGG: ssa:SSA_0217 two-component response transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; SPTR: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
 
     0.938
ADK81812.1
Periplasmic binding protein/LacI transcriptional regulator; COGs: COG1879 ABC-type sugar transport system periplasmic component; InterPro IPR001761; KEGG: cac:CAC1453 ribose ABC transporter periplasmic ribose-binding protein; PFAM: periplasmic binding protein/LacI transcriptional regulator; SPTR: Periplasmic binding protein/LacI transcriptional regulator; PFAM: family.
 
    0.865
ADK80193.1
COGs: COG4585 Signal transduction histidine kinase; InterPro IPR011712:IPR003594; KEGG: cbi:CLJ_B1493 sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein; SPTR: Histidine kinase-like ATPase; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
    0.671
ADK83177.1
COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003594; KEGG: cbe:Cbei_3866 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: Two-component system sensor histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
    0.661
ADK82702.1
COGs: COG1879 ABC-type sugar transport system periplasmic component; KEGG: cac:CAC1453 ribose ABC transporter periplasmic ribose-binding protein; SPTR: Putative uncharacterized protein; PFAM: family.
  
    0.642
ADK79534.1
COGs: COG4585 Signal transduction histidine kinase; InterPro IPR011712:IPR003594; KEGG: cbh:CLC_1414 sensor histidine kinase; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SPTR: Sensor histidine kinase; PFAM: Histidine kinase.
 
    0.596
ADK82941.1
COGs: COG4585 Signal transduction histidine kinase; InterPro IPR005479:IPR003594:IPR011712; KEGG: cbi:CLJ_B1493 sensor histidine kinase; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: Sensor histidine kinase; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
    0.586
ADK79691.1
COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003594; KEGG: cac:CAC0864 histidine kinase-like ATPase; PFAM: ATP-binding region ATPase domain protein; SPTR: Histidine kinase-like ATPase; PFAM: Histidine kinase.
 
    0.555
ADK82065.1
PfkB domain protein; COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR011611; KEGG: bfa:Bfae_04860 argininosuccinate lyase; PFAM: PfkB domain protein; SPTR: Argininosuccinate lyase; PFAM: pfkB family carbohydrate kinase.
  
    0.515
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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