STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK82181.1COGs: COG1879 ABC-type sugar transport system periplasmic component; KEGG: cbe:Cbei_1380 periplasmic binding protein/LacI transcriptional regulator; SPTR: Putative uncharacterized protein. (352 aa)    
Predicted Functional Partners:
ADK82502.1
Periplasmic binding protein/LacI transcriptional regulator; COGs: COG1879 ABC-type sugar transport system periplasmic component; InterPro IPR001761; KEGG: cbe:Cbei_1380 periplasmic binding protein/LacI transcriptional regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; SPTR: Periplasmic binding protein/LacI transcriptional regulator; PFAM: family.
  
  
  0.975
ADK82183.1
ABC transporter related protein; COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003593:IPR003439:IPR017871; KEGG: msu:MS0062 L-arabinose transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Putative uncharacterized protein; PFAM: ABC transporter.
  
 0.954
ADK82182.1
Inner-membrane translocator; COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: str:Sterm_3539 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: Putative uncharacterized protein; PFAM: Branched-chain amino acid transport system / permease component.
  
 
 0.785
ADK79624.1
COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014:IPR001610:IPR003661:IPR003594:IPR 001789:IPR004358:IPR013767:IPR008207:IPR005467:IPR000700; KEGG: dma:DMR_25470 two-component hybrid sensor and regulator; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; response regulator receiver; Hpt domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; SPTR: Sensor protein; TIGRFAM: PAS [...]
  
 
 0.714
ADK83212.1
COGs: COG0642 Signal transduction histidine kinase; InterProIPR003661:IPR003594:IPR001789:IPR008207:IPR 000014:IPR005467:IPR000700:IPR004358; KEGG: dal:Dalk_3917 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; Hpt domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; Hpt domain protein; SPTR: Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regu [...]
  
 
 0.711
ADK82184.1
COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590:IPR016160; KEGG: msi:Msm_0467 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; PFAM: Aldehyde Dehydrogenase; SPTR: Succinate-semialdehyde dehydrogenase; PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family.
     
 0.708
ADK81342.1
PAS/PAC sensor hybrid histidine kinase; COGs: COG0642 Signal transduction histidine kinase; InterProIPR004358:IPR001789:IPR000014:IPR003661:IPR 003594:IPR013656:IPR005467; KEGG: dvl:Dvul_1102 signal transduction histidine kinase, nitrogen specific, NtrB; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; PAS fold-4 domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; PAS domain containing protein; histidine kinase A domain protein; SPTR: Sensor protein; TIGRFAM: PAS sensor protein; PFA [...]
   
 
 0.700
ADK81952.1
PAS/PAC sensor hybrid histidine kinase; COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014:IPR013656:IPR013767:IPR003661:IPR 003594:IPR001789:IPR004358:IPR005467:IPR000700:IPR001610; KEGG: glo:Glov_3522 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; PAS fold-4 domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; response regulator rec [...]
   
 
 0.698
ADK82628.1
PAS/PAC sensor hybrid histidine kinase; COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014:IPR003661:IPR003594:IPR001789:IPR 013656:IPR013655:IPR004358:IPR005467; KEGG: lbf:LBF_0869 sensor histidine kinase and response regulator of a two component complex; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold-3 domain protein; response regulator receiver; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; SPTR: [...]
   
 
 0.698
ADK82077.1
GAF sensor hybrid histidine kinase; COGs: COG0642 Signal transduction histidine kinase; InterProIPR003018:IPR003661:IPR003594:IPR001789:IPR 004358:IPR005467; KEGG: dma:DMR_01670 two-component hybrid sensor and regulator; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; SPTR: Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator re [...]
   
 
 0.696
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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