STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK82201.1Hypothetical protein. (34 aa)    
Predicted Functional Partners:
ADK82202.1
Putative PTS IIA-like nitrogen-regulatory protein PtsN; COGs: COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); InterPro IPR002178; KEGG: rba:RB8584 PTS system, fructose-specific enzyme II, BC component; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; SPTR: Putative PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; TIGRFAM: PTS system, fructose subfamily, IIA component.
       0.773
ADK82203.1
UspA domain protein; InterPro IPR006016; KEGG: htu:Htur_0973 UspA domain protein; PFAM: UspA domain protein; SPTR: UspA domain protein; PFAM: Universal stress protein family.
       0.741
atpD
V-type ATPase, D subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
       0.741
atpB-2
H+transporting two-sector ATPase alpha/beta subunit central region; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.
       0.741
atpA-2
Sodium-transporting two-sector ATPase; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
       0.741
ADK82207.1
H+transporting two-sector ATPase E subunit; InterPro IPR002842; KEGG: pab:PAB1182 V-type ATP synthase subunit E; PFAM: H+transporting two-sector ATPase E subunit; SPTR: V-type ATP synthase subunit E; PFAM: ATP synthase (E/31 kDa) subunit.
       0.741
ADK82208.1
COGs: COG1436 H+-ATPase subunit F; InterPro IPR008218; KEGG: cpy:Cphy_3444 vacuolar H+transporting two-sector ATPase F subunit; PFAM: Vacuolar H+transporting two-sector ATPase F subunit; SPTR: ATP synthase subunit; PFAM: ATP synthase (F/14-kDa) subunit.
       0.716
ADK82209.1
H+transporting two-sector ATPase C subunit; InterPro IPR000454:IPR000245:IPR002379; KEGG: trq:TRQ2_1105 H+transporting two-sector ATPase C subunit; PFAM: H+transporting two-sector ATPase C subunit; SPTR: H+transporting two-sector ATPase C subunit; PFAM: ATP synthase subunit C; Belongs to the V-ATPase proteolipid subunit family.
       0.716
ADK82210.1
V-type ATPase 116 kDa subunit; COGs: COG1269 H+-ATPase subunit I; InterPro IPR002490; KEGG: hor:Hore_19440 H(+)-transporting two-sector ATPase; PFAM: V-type ATPase 116 kDa subunit; SPTR: Putative V-type ATP synthase, subunit I; PFAM: V-type ATPase 116kDa subunit family.
       0.674
ADK82211.1
COGs: COG1527 H+-ATPase subunit C; InterPro IPR002843; KEGG: nph:NP1026A V-type ATP synthase subunit C; PFAM: H+transporting two-sector ATPase C (AC39) subunit; SPTR: H(+)-transporting two-sector ATPase subunit C.a (A-type ATP synthase); PFAM: ATP synthase (C/AC39) subunit.
       0.674
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.