STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK82242.1Tetratricopeptide TPR_2 repeat protein; COGs: COG3063 Tfp pilus assembly protein PilF; InterPro IPR019734:IPR013026:IPR001440:IPR013105; KEGG: bdu:BDU_193 hypothetical protein; PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SPTR: TPR domain protein; PFAM: Tetratricopeptide repeat. (384 aa)    
Predicted Functional Partners:
ADK79481.1
KEGG: tde:TDE2751 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
 
 
 
 0.839
ADK82241.1
KEGG: tde:TDE2072 hypothetical protein; SPTR: Putative uncharacterized protein.
     
 0.823
ADK81975.1
WD40 repeat, subgroup; InterProIPR019781:IPR019782:IPR017986:IPR001680:IPR 019775; KEGG: tde:TDE2184 hypothetical protein; PFAM: WD40 repeat, subgroup; SMART: WD-40 repeat protein; SPTR: Putative uncharacterized protein; PFAM: WD domain, G-beta repeat.
  
 0.817
ADK82243.1
Radical SAM enzyme, Cfr family; COGs: COG0820 Fe-S-cluster redox enzyme; InterPro IPR004383:IPR007197; KEGG: tde:TDE2074 radical SAM protein; PFAM: Radical SAM domain protein; SPTR: Ribosomal RNA large subunit methyltransferase N; TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM superfamily; TIGRFAM: radical SAM enzyme, Cfr family; Belongs to the radical SAM superfamily. RlmN family.
       0.784
ADK82913.1
Restriction endonuclease; InterProIPR019734:IPR013105:IPR001440:IPR007560:IPR 013026; KEGG: tpp:TPASS_0915 hypothetical protein; PFAM: restriction endonuclease; Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: TPR domain protein; PFAM: Restriction endonuclease.
 
     0.778
ADK81479.1
Restriction endonuclease; InterProIPR019734:IPR001440:IPR013105:IPR007560:IPR 013026; KEGG: tde:TDE1125 TPR domain-containing protein; PFAM: restriction endonuclease; Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SPTR: TPR domain protein; PFAM: Restriction endonuclease; Tetratricopeptide repeat.
 
     0.777
ADK81478.1
Tetratricopeptide TPR_2 repeat protein; InterPro IPR019734:IPR001440:IPR013105:IPR013026; KEGG: tde:TDE1126 TPR domain-containing protein; PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SPTR: TPR domain protein; PFAM: Tetratricopeptide repeat.
 
 
 0.771
ADK82298.1
KEGG: tde:TDE2293 hypothetical protein; SPTR: Putative uncharacterized protein.
 
 
 0.767
ADK81560.1
Tetratricopeptide TPR_2 repeat protein; InterPro IPR019734:IPR013105:IPR001440:IPR013026; KEGG: tde:TDE1244 TPR domain-containing protein; PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: TPR domain protein; PFAM: Tetratricopeptide repeat.
  
     0.762
ADK81198.1
Tetratricopeptide TPR_2 repeat protein; InterPro IPR019734:IPR013026:IPR013105:IPR001440; KEGG: tde:TDE1348 TPR domain-containing protein; PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: TPR domain protein; manually curated; PFAM: Tetratricopeptide repeat.
 
   
 0.752
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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