STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK82365.1Integral membrane sensor signal transduction histidine kinase; COGs: COG2972 signal transduction protein with a C-terminal ATPase domain; InterPro IPR003660:IPR010559:IPR003594; KEGG: cbe:Cbei_2898 histidine kinase internal region; PFAM: histidine kinase internal region; histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; SMART: histidine kinase HAMP region domain protein; SPTR: Putative uncharacterized protein; PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (615 aa)    
Predicted Functional Partners:
ADK82364.1
Two component transcriptional regulator, AraC family; COGs: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; InterPro IPR001789:IPR018060:IPR000005; KEGG: cbe:Cbei_2897 response regulator receiver protein; PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; SPTR: Putative uncharacterized protein; PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family.
 
 0.985
ADK81758.1
Two component transcriptional regulator, AraC family; COGs: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; InterProIPR018062:IPR001789:IPR000005:IPR018060:IPR 020449; KEGG: cpy:Cphy_3282 two component AraC family transcriptional regulator; PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; SPTR: Putative uncharacterized protein; PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family.
 
 
 0.915
ADK81184.1
Two component transcriptional regulator, AraC family; COGs: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; InterPro IPR001789:IPR018060:IPR018062:IPR000005; KEGG: cpy:Cphy_3282 two component AraC family transcriptional regulator; PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; SPTR: Putative uncharacterized protein; PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family.
 
 
 0.913
ADK82511.1
Two component transcriptional regulator, AraC family; COGs: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; InterPro IPR001789:IPR018060:IPR000005:IPR020449; KEGG: cce:Ccel_1228 two component transcriptional regulator, AraC family; PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; SPTR: Two component transcriptional regulator, AraC family; PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, Ara [...]
 
 0.909
ADK80491.1
Two component transcriptional regulator, AraC family; COGs: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; InterProIPR018062:IPR020449:IPR001789:IPR000005:IPR 018060; KEGG: clo:HMPREF0868_0308 response regulator receiver domain protein; PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; Helix-turn-helix, AraC domain; SPTR: Putative uncharacterized protein; PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family.
 
 0.895
ADK82500.1
Two component transcriptional regulator, AraC family; COGs: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; InterProIPR001789:IPR018060:IPR000005:IPR018062:IPR 020449; KEGG: cbe:Cbei_1381 response regulator receiver protein; PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; SPTR: Response regulator receiver protein; PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family.
 
 
 0.890
ADK83155.1
Two component transcriptional regulator, AraC family; COGs: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; InterProIPR001789:IPR000005:IPR018062:IPR018060:IPR 020449; KEGG: cpy:Cphy_1583 two component AraC family transcriptional regulator; PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; SPTR: Two component transcriptional regulator, AraC family; PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix prot [...]
 
 
 0.875
ADK79766.1
COGs: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; InterPro IPR001789:IPR018060; KEGG: bsu:BSU06960 two-component response regulator [YesM]; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Uncharacterized transcriptional regulatory protein yesN; PFAM: Response regulator receiver domain.
 
 
 0.857
ADK82363.1
Extracellular solute-binding protein family 1; COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: cbe:Cbei_2894 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: Putative uncharacterized protein; PFAM: Bacterial extracellular solute-binding protein.
 
   
 0.627
ADK82361.1
COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: cbe:Cbei_2892 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Putative uncharacterized protein; PFAM: Binding-protein-dependent transport system inner membrane component.
 
   
 0.548
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.