STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK82403.1Lysine exporter protein (LYSE/YGGA); COGs: COG1280 Putative threonine efflux protein; InterPro IPR001123; KEGG: par:Psyc_2059 LysE family amino acid efflux protein; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: Putative amino acid efflux pump, RhtB/LysE family; manually curated; PFAM: LysE type translocator. (212 aa)    
Predicted Functional Partners:
ADK82402.1
Lysine exporter protein (LYSE/YGGA); COGs: COG1280 Putative threonine efflux protein; InterPro IPR001123; KEGG: rce:RC1_1835 translocator protein, LysE family protein; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: Translocator protein, LysE family protein; PFAM: LysE type translocator.
 
    
0.829
ADK82399.1
Polar amino acid ABC transporter, inner membrane subunit; COGs: COG4597 ABC-type amino acid transport system permease component; InterPro IPR000515:IPR010065; KEGG: vvy:VV1556 ABC-type amino acid transport system, permease component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Amino acid ABC transporter permease protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [...]
       0.678
ADK82400.1
Polar amino acid ABC transporter, inner membrane subunit; COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR000515:IPR010065; KEGG: hch:HCH_05809 ABC-type amino acid transport system, permease component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: ABC-type amino acid transport system, permease component; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/G [...]
       0.678
ADK82401.1
ABC transporter related protein; COGs: COG1126 ABC-type polar amino acid transport system ATPase component; InterPro IPR003593:IPR003439:IPR017871; KEGG: cko:CKO_04684 hypothetical protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Putative uncharacterized protein; PFAM: ABC transporter.
       0.678
ADK82404.1
ybaK/ebsC protein; COGs: COG2606 conserved hypothetical protein; InterPro IPR007214:IPR004369; KEGG: pdi:BDI_1373 putative transcriptional regulator; PFAM: YbaK/prolyl-tRNA synthetase associated region; SPTR: Putative uncharacterized protein; TIGRFAM: ybaK/ebsC protein; PFAM: YbaK / prolyl-tRNA synthetases associated domain; TIGRFAM: ybaK/ebsC protein.
       0.626
ADK82398.1
Extracellular solute-binding protein family 3; COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR001638:IPR018313; KEGG: hch:HCH_05807 amino acid ABC transporter periplasmic protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; SPTR: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: lysine-arginine-ornithine-binding periplasmic protein.
       0.489
ADK79993.1
Lysine exporter protein (LYSE/YGGA); COGs: COG1280 Putative threonine efflux protein; InterPro IPR001123; KEGG: ppr:PBPRA0299 hypothetical protein; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: Putative uncharacterized protein; PFAM: LysE type translocator.
  
     0.441
ADK80703.1
Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
    
   0.412
ADK81432.1
COGs: COG1776 Chemotaxis protein CheC inhibitor of MCP methylation; KEGG: cyh:Cyan8802_0954 CheC, inhibitor of MCP methylation; SPTR: CheC, inhibitor of MCP methylation.
    
   0.412
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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