STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK82450.1Transcriptional regulator, AsnC family; COGs: COG1522 Transcriptional regulators; InterProIPR019888:IPR000485:IPR001845:IPR019887:IPR 019885; KEGG: pat:Patl_2996 AsnC family transcriptional regulator; PFAM: Transcription regulator, AsnC-type-like; regulatory protein ArsR; SMART: Transcription regulator, AsnC-type; SPTR: Lrp/AsnC family transcriptional regulator; PFAM: MarR family; AsnC family. (155 aa)    
Predicted Functional Partners:
ADK82449.1
Thiamine pyrophosphate protein domain protein TPP-binding protein; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
 
     0.601
ADK82448.1
COGs: COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase gamma subunit; InterPro IPR019752; KEGG: bth:BT_0429 indolepyruvate oxidoreductase subunit beta; PFAM: Pyruvate/ketoisovalerate oxidoreductase; SPTR: Indolepyruvate oxidoreductase subunit iorB; PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, beta subunit.
 
     0.587
buk-2
COGs: COG3426 Butyrate kinase; InterPro IPR011245:IPR000890; KEGG: nth:Nther_2700 butyrate kinase; PFAM: acetate and butyrate kinase; SPTR: Butyrate kinase; TIGRFAM: butyrate kinase; PFAM: Acetokinase family; TIGRFAM: butyrate kinase; Belongs to the acetokinase family.
       0.512
ADK82447.1
Phosphate butyryltransferase; COGs: COG0280 Phosphotransacetylase; InterPro IPR012147:IPR002505; KEGG: tit:Thit_1910 phosphate butyryltransferase; PFAM: phosphate acetyl/butaryl transferase; PRIAM: Phosphate butyryltransferase; SPTR: Phosphate butyryltransferase; PFAM: Phosphate acetyl/butaryl transferase.
       0.512
ADK82445.1
Transcriptional regulator, XRE family; COGs: COG0280 Phosphotransacetylase; InterPro IPR001387:IPR013096:IPR002505; KEGG: ddf:DEFDS_1240 phosphate butyryltransferase; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; phosphate acetyl/butaryl transferase; SMART: helix-turn-helix domain protein; SPTR: Phosphate butyryltransferase; PFAM: Cupin domain; Phosphate acetyl/butaryl transferase; Helix-turn-helix.
  
  
 0.489
ADK81442.1
COGs: COG0069 Glutamate synthase domain 2; InterProIPR000583:IPR006982:IPR002932:IPR002489:IPR 017932; KEGG: sus:Acid_3816 glutamate synthase (NADH) large subunit; PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein; PRIAM: Glutamate synthase (ferredoxin); SPTR: Glutamate synthase (NADH) large subunit; PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II.
     
 0.467
ADK82451.1
Hypothetical protein; InterPro IPR010916; KEGG: sha:SH0326 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.423
ADK80337.1
Transcriptional regulator, AsnC family; COGs: COG1522 Transcriptional regulators; InterPro IPR019887:IPR000485:IPR019888; KEGG: pho:PH1692 transcriptional regulator; PFAM: Transcription regulator, AsnC-type-like; SMART: Transcription regulator, AsnC-type; SPTR: Putative uncharacterized protein; PFAM: AsnC family.
  
     0.401
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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