STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK82718.1Transcriptional regulator, LacI family; COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR001761; KEGG: tpd:Teth39_0633 LacI family transcription regulator; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; SPTR: Transcriptional regulator, LacI family; PFAM: Bacterial regulatory proteins, lacI family; family. (329 aa)    
Predicted Functional Partners:
ADK82719.1
Conserved hypothetical protein; COGs: COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I; KEGG: efa:EF1816 hypothetical protein; SPTR: Predicted protein.
       0.773
ADK82720.1
COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: hau:Haur_1152 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.
       0.773
ADK82721.1
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: hau:Haur_1151 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.
       0.773
ADK81337.1
Transcriptional regulator, LacI family; COGs: COG1609 Transcriptional regulators; InterPro IPR000843; KEGG: tte:TTE0201 transcriptional regulator; PFAM: regulatory protein LacI; SMART: regulatory protein LacI; SPTR: Putative uncharacterized protein; PFAM: Bacterial regulatory proteins, lacI family; family.
  
     0.772
ADK80964.1
Transcriptional regulator, GntR family with LacI sensor; COGs: COG1609 Transcriptional regulators; InterPro IPR000524:IPR001761; KEGG: pjd:Pjdr2_0522 transcriptional regulator, GntR family with LacI sensor; PFAM: regulatory protein GntR HTH; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein GntR HTH; SPTR: Transcriptional regulator, GntR family with LacI sensor; PFAM: Bacterial regulatory proteins, gntR family; family.
  
     0.712
ADK81442.1
COGs: COG0069 Glutamate synthase domain 2; InterProIPR000583:IPR006982:IPR002932:IPR002489:IPR 017932; KEGG: sus:Acid_3816 glutamate synthase (NADH) large subunit; PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein; PRIAM: Glutamate synthase (ferredoxin); SPTR: Glutamate synthase (NADH) large subunit; PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II.
    
 
 0.682
ADK82722.1
Extracellular solute-binding protein family 1; COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: hor:Hore_15560 extracellular solute-binding protein family 1; PFAM: extracellular solute-binding protein family 1; SPTR: Extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding protein.
  
  
 0.682
ADK81805.1
COGs: COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component); InterProIPR001020:IPR000121:IPR004701:IPR005698:IPR 008731:IPR008279:IPR012844:IPR006318:IPR000032; KEGG: rca:Rcas_2048 phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; PTS system fructose subfamily IIA component; phosphoryl transfer system HPr; PEP-utilising protein mobile region; SPTR: Phosphoenolpyruvate-protein phosphotransferase; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; dihydroxyacetone kinase, phosphotransfer subunit; phosph [...]
   
 
 0.545
ADK82717.1
SNF2-related protein; COGs: COG0553 Superfamily II DNA/RNA helicase SNF2 family; InterProIPR014001:IPR001650:IPR007527:IPR000330:IPR 014021; KEGG: drt:Dret_0283 SNF2-related protein; PFAM: SNF2-related protein; zinc finger SWIM domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: SNF2-related protein; PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain; SWIM zinc finger.
       0.520
ADK79219.1
COGs: COG0469 Pyruvate kinase; InterPro IPR015793:IPR001697:IPR015794:IPR018209; KEGG: pth:PTH_2214 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; PRIAM: Pyruvate kinase; SPTR: Pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase; Belongs to the pyruvate kinase family.
    
 
 0.512
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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