STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK82739.1Transposase IS3/IS911 family protein; InterPro IPR002514; KEGG: dsy:DSY0820 hypothetical protein; PFAM: transposase IS3/IS911 family protein; SPTR: Transposase; PFAM: Transposase. (91 aa)    
Predicted Functional Partners:
ADK82738.1
Integrase catalytic region; COGs: COG2801 Transposase and inactivated derivatives; InterPro IPR001584; KEGG: dsy:DSY0819 hypothetical protein; PFAM: Integrase catalytic region; SPTR: Putative uncharacterized protein; PFAM: Integrase core domain.
  
  
 0.800
ADK82740.1
Hypothetical protein; KEGG: hor:Hore_06690 methyl-accepting chemotaxis sensory transducer; SPTR: Myosin-like protein.
       0.567
ADK82741.1
KEGG: tai:Taci_0690 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: DRTGG domain.
       0.567
ADK82742.1
COGs: COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase); InterPro IPR003594; KEGG: pdi:BDI_1096 putative anti-sigma regulatory factor; PFAM: ATP-binding region ATPase domain protein; SPTR: Putative uncharacterized protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
       0.527
ADK82743.1
Fe-S cluster domain protein; COGs: COG4624 Iron only hydrogenase large subunit C-terminal domain; InterPro IPR001450:IPR007202:IPR017900:IPR017896; KEGG: pdi:BDI_1095 ferredoxin 2; PFAM: Fe-S cluster domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: Putative uncharacterized protein; PFAM: Iron only hydrogenase large subunit, C-terminal domain; Putative Fe-S cluster; 4Fe-4S binding domain.
       0.527
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.