STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK82766.1COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509; KEGG: tde:TDE2434 polysaccharide deacetylase family protein; PFAM: polysaccharide deacetylase; SPTR: Polysaccharide deacetylase family protein; PFAM: Polysaccharide deacetylase. (752 aa)    
Predicted Functional Partners:
ADK82349.1
Glycosyl transferase family 2; InterPro IPR001173; KEGG: caa:Caka_1159 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2.
  
  
 0.849
ADK82298.1
KEGG: tde:TDE2293 hypothetical protein; SPTR: Putative uncharacterized protein.
  
  
 0.779
ADK79481.1
KEGG: tde:TDE2751 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
  
     0.771
ADK81203.1
OmpA/MotB domain protein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665; KEGG: tde:TDE2028 OmpA family protein; PFAM: OmpA/MotB domain protein; SPTR: OmpA family protein; PFAM: OmpA family.
  
     0.771
ADK81475.1
KEGG: cts:Ctha_0299 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: FecR protein.
 
   
 0.771
ADK80625.1
Protein serine/threonine phosphatase; COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterProIPR018181:IPR003660:IPR010822:IPR001932:IPR 003961; KEGG: tde:TDE2115 HAMP domain-containing protein; PFAM: Stage II sporulation E family protein; histidine kinase HAMP region domain protein; SMART: protein phosphatase 2C domain protein; histidine kinase HAMP region domain protein; SPTR: HAMP domain protein; PFAM: HAMP domain; Stage II sporulation protein E (SpoIIE).
  
   
 0.768
ADK81565.1
COGs: COG1452 Organic solvent tolerance protein OstA; KEGG: tde:TDE1011 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.764
ADK80642.1
TPR repeat-containing protein; InterPro IPR001440:IPR019734:IPR013026; KEGG: tde:TDE1887 TPR domain-containing protein; PFAM: TPR repeat-containing protein; SPTR: TPR domain protein; PFAM: Tetratricopeptide repeat.
 
  
 0.763
ADK83018.1
Hemagluttinin repeat-containing protein; InterPro IPR008619; KEGG: sml:Smlt1009 putative glycine-rich autotransporter protein; PFAM: Haemagluttinin repeat-containing protein; SPTR: Outer membrane autotransporter barrel domain protein.
 
   
 0.762
ADK79413.1
Phosphatidate cytidylyltransferase; COGs: COG0170 Dolichol kinase; InterPro IPR000374; KEGG: tde:TDE2717 phosphatidate cytidylyltransferase, putative; PFAM: phosphatidate cytidylyltransferase; SPTR: Phosphatidate cytidylyltransferase; PFAM: Cytidylyltransferase family.
 
     0.761
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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