STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK82814.1Putative sigma E regulatory protein, MucB/RseB; KEGG: tde:TDE2703 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1329). (258 aa)    
Predicted Functional Partners:
ADK82813.1
Conserved hypothetical protein; COGs: COG1033 exporter of the RND superfamily protein; InterPro IPR000731:IPR001036; KEGG: tde:TDE2704 hypothetical protein; SPTR: Membrane protein, putative; PFAM: MMPL family; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type.
  
 0.963
ADK82815.1
KEGG: tde:TDE2702 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.946
ADK80400.1
COGs: COG1033 exporter of the RND superfamily protein; InterPro IPR018247:IPR000731; KEGG: cts:Ctha_1453 exporter of the RND superfamily protein-like protein; SPTR: Putative antibiotic transport protein; PFAM: MMPL family; TIGRFAM: The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family.
  
 0.917
ADK82808.1
Conserved hypothetical protein; COGs: COG1033 exporter of the RND superfamily protein; InterPro IPR000731:IPR001036; KEGG: tde:TDE2704 hypothetical protein; SPTR: Putative membrane protein; PFAM: MMPL family.
  
 0.875
ADK82810.1
KEGG: tde:TDE2702 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.837
ADK82420.1
Conserved hypothetical protein; COGs: COG1033 exporter of the RND superfamily protein; InterPro IPR000731; KEGG: tde:TDE2006 hypothetical protein; SPTR: Membrane protein, putative; PFAM: MMPL family.
  
 0.823
ADK80401.1
KEGG: abb:ABBFA_003401 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.782
ADK82422.1
KEGG: tde:TDE2011 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.782
ADK82974.1
Hypothetical protein; KEGG: hor:Hore_23220 putative sigma E regulatory protein, MucB/RseB; SPTR: Putative sigma E regulatory protein, MucB/RseB.
  
   
 0.780
ADK82975.1
Protein of unknown function DUF214; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: hor:Hore_23230 ABC-type transport system, involved in lipoprotein release, permease component; PFAM: protein of unknown function DUF214; SPTR: ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
 
 
 
 0.665
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.